RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 MARCH6O60337 910 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 LRP3O75074 770 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ADAM23O75077 832 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 RECQL4O94761 1208 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 LYPLA2O95372 231 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 THP07101 528 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 RETP07949 1114 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 RHOP08100 348 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 CEBPBP17676 345 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 IGFBP6P24592 240 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 SOX18P35713 384 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ATP11AP98196 1134 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ELAVL2Q12926 359 aaKnown RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ZNF211Q13398 564 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 TOB2Q14106 344 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 GRM2Q14416 872 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 FAM78AQ5JUQ0 283 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 PRR23BQ6ZRT6 265 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 RTL10Q7L3V2 364 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ZNF438Q7Z4V0 828 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 SLFN12Q8IYM2 578 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 CELF5Q8N6W0 485 aaKnown RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ELSPBP1Q96BH3 223 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 NACC1Q96RE7 527 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 EIF2AK1Q9BQI3 630 aaKnown RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 RBSNQ9H1K0 784 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 CHRDQ9H2X0 955 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 FZD8Q9H461 694 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 PDZD7Q9H5P4 517 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 BRD9Q9H8M2 597 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ANKEF1Q9NU02 776 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 PRMT7Q9NVM4 692 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 SNTG2Q9NY99 539 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 ABI2Q9NYB9 513 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 TRIM33Q9UPN9 1127 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 BACE2Q9Y5Z0 518 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 PIAS3Q9Y6X2 628 aa6.4□□□□□ -1.38
HMGN1P36-201ENST00000446623 TRIP11Q15643 1979 aa6.4□□□□□ -1.39
HMGN1P36-201ENST00000446623 LAMA5O15230 3695 aa6.4□□□□□ -1.39
HMGN1P36-201ENST00000446623 FLNBO75369 2602 aaKnown RBP6.4□□□□□ -1.39
HMGN1P36-201ENST00000446623 SPAG17Q6Q759 2223 aa6.4□□□□□ -1.39
HMGN1P36-201ENST00000446623 ARHGEF37A1IGU5 675 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 LRRIQ4A6NIV6 560 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 TMEM189-UBE2V1I3L0A0 370 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 I3L4J1 428 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 K7ELQ4 463 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 B3GAT3O94766 335 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 ABLIM3O94929 683 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PDGFAP04085 211 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PTPN2P17706 415 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PSMA5P28066 241 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 RBM25P49756 843 aaKnown RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 RARRES1P49788 294 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CCR3P51677 355 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CLCNKBP51801 687 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 SATB1Q01826 763 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 ROR1Q01973 937 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 DMWDQ09019 674 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 HYAL2Q12891 473 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 SIM2Q14190 667 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PPP2R5DQ14738 602 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CSRP2Q16527 193 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PRSS36Q5K4E3 855 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CDCA2Q69YH5 1023 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CD300LGQ6UXG3 332 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PRR23CQ6ZRP0 262 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PIK3AP1Q6ZUJ8 805 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 ANKS3Q6ZW76 656 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 MAP4K3Q8IVH8 894 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 NOSTRINQ8IVI9 506 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 PIGOQ8TEQ8 1089 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 TTC9Q92623 222 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 TCEAL4Q96EI5 215 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 ZNF274Q96GC6 653 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CHAMP1Q96JM3 812 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CCDC43Q96MW1 224 aaKnown RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 NAP1L4Q99733 375 aaKnown RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CORO1BQ9BR76 489 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 IER2Q9BTL4 223 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 TRMT61BQ9BVS5 477 aaKnown RBP6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 LMAN1LQ9HAT1 526 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 ZFP14Q9HCL3 533 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 GPRC5CQ9NQ84 441 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 TRPV5Q9NQA5 729 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 SEMA4GQ9NTN9 838 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 GJB4Q9NTQ9 266 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 CNTN3Q9P232 1028 aa6.39□□□□□ -1.39
HMGN1P36-201ENST00000446623 HELZ2Q9BYK8 2649 aaKnown RBP6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 WDFY3Q8IZQ1 3526 aa6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 SMG1Q96Q15 3661 aaKnown RBP6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 A0A087WWV3 80 aa6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 WDR27A2RRH5 827 aa6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 CHURC1-FNTBB4DL54 471 aa6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 PRRG1O14668 218 aa6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 N4BP3O15049 544 aa6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 TRAPPC3O43617 180 aa6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 USO1O60763 962 aaKnown RBP6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 BAG4O95429 457 aaKnown RBP6.38□□□□□ -1.39
HMGN1P36-201ENST00000446623 SEC24AO95486 1093 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms