RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 ZSWIM3Q96MP5 696 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 VRTNQ9H8Y1 702 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 CRTAC1Q9NQ79 661 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 GDE1Q9NZC3 331 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 NXF1Q9UBU9 619 aaKnown RBP20.11■□□□□ 0.81
HDAC4-203ENST00000445704 ASB3Q9Y575 518 aa20.11■□□□□ 0.81
HDAC4-203ENST00000445704 A0A1W2PRU2 124 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 TACC1O75410 805 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 CFHP08603 1231 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 PDGFRBP09619 1106 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 SRFP11831 508 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 CD44P16070 742 aaKnown RBP20.1■□□□□ 0.81
HDAC4-203ENST00000445704 FCARP24071 287 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 CYP2F1P24903 491 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 PSMC2P35998 433 aaKnown RBP20.1■□□□□ 0.81
HDAC4-203ENST00000445704 PPP3CAQ08209 521 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 ZNF699Q32M78 642 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 FAM171BQ6P995 826 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 INTS8Q75QN2 995 aaKnown RBP20.1■□□□□ 0.81
HDAC4-203ENST00000445704 GAREM2Q75VX8 874 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 FBXL6Q8N531 539 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 FAM200AQ8TCP9 573 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 PLA2G2FQ9BZM2 168 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 SMYD3Q9H7B4 428 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 CDH9Q9ULB4 789 aa20.1■□□□□ 0.81
HDAC4-203ENST00000445704 TRIM49BA6NDI0 452 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 IKBKBO14920 756 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 BMP6P22004 513 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 RAP1GAPP47736 663 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 UBE2HP62256 183 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 VEPH1Q14D04 833 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 FAM78AQ5JUQ0 283 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 STXBP5Q5T5C0 1151 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 SDHAF4Q5VUM1 108 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 ANKRD40Q6AI12 368 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 ITIH5Q86UX2 942 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 OR6B3Q8NGW1 331 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 SDCBP2Q9H190 292 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 IL21Q9HBE4 155 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 ABCB6Q9NP58 842 aa20.09■□□□□ 0.81
HDAC4-203ENST00000445704 KMT2EQ8IZD2 1858 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 HLA-DRAP01903 254 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 KRT13P13646 458 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 GCLMP48507 274 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 VCPP55072 806 aaKnown RBP20.08■□□□□ 0.81
HDAC4-203ENST00000445704 CDH8P55286 799 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 DDR2Q16832 855 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 CFAP221Q4G0U5 840 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 ZNF667Q5HYK9 610 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 TANGO2Q6ICL3 276 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 SCARA5Q6ZMJ2 495 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 SPATA2LQ8IUW3 424 aaPredicted RBP20.08■□□□□ 0.81
HDAC4-203ENST00000445704 ZC3H3Q8IXZ2 948 aaKnown RBP20.08■□□□□ 0.81
HDAC4-203ENST00000445704 MYLPFQ96A32 169 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 ASB16Q96NS5 453 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 SNX25Q9H3E2 840 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 DPEP3Q9H4B8 488 aa20.08■□□□□ 0.81
HDAC4-203ENST00000445704 NCANO14594 1321 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 BIN1O00499 593 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 CETN3O15182 167 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 ECI2O75521 394 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 CLSTN1O94985 981 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 FAM163BP0C2L3 166 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 HMGA1P17096 107 aaKnown RBP20.07■□□□□ 0.8
HDAC4-203ENST00000445704 GABRR2P28476 465 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 GNL1P36915 607 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-203ENST00000445704 PIK3CAP42336 1068 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 MCCD1P59942 119 aaPredicted RBP20.07■□□□□ 0.8
HDAC4-203ENST00000445704 GPC5P78333 572 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 SPOPLQ6IQ16 392 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 SUGP1Q8IWZ8 645 aaKnown RBP20.07■□□□□ 0.8
HDAC4-203ENST00000445704 FUBP3Q96I24 572 aaKnown RBP eCLIP20.07■□□□□ 0.8
HDAC4-203ENST00000445704 MKNK1Q9BUB5 465 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 MMRN2Q9H8L6 949 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 SLC2A4RGQ9NR83 387 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 FBXL21Q9UKT6 434 aa20.07■□□□□ 0.8
HDAC4-203ENST00000445704 ZNF318Q5VUA4 2279 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 KRBA1A5PL33 1030 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 LRRN2O75325 713 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 ASS1P00966 412 aaKnown RBP20.06■□□□□ 0.8
HDAC4-203ENST00000445704 CCNE1P24864 410 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 CYP4F8P98187 520 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 ENPEPQ07075 957 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 MORC3Q14149 939 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 SGSM1Q2NKQ1 1148 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 MDH1BQ5I0G3 518 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 IER5LQ5T953 404 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 SIX5Q8N196 739 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 ZSCAN18Q8TBC5 510 aaPredicted RBP20.06■□□□□ 0.8
HDAC4-203ENST00000445704 TAS1R2Q8TE23 839 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 ELSPBP1Q96BH3 223 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 PCED1BQ96HM7 432 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 TSG101Q99816 390 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 GTPBP4Q9BZE4 634 aaKnown RBP20.06■□□□□ 0.8
HDAC4-203ENST00000445704 ATXN3LQ9H3M9 355 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.06■□□□□ 0.8
HDAC4-203ENST00000445704 WNT16Q9UBV4 365 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 CA14Q9ULX7 337 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 HCN4Q9Y3Q4 1203 aa20.06■□□□□ 0.8
HDAC4-203ENST00000445704 COL4A3Q01955 1670 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms