RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 LRRC38Q5VT99 294 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 DRICH1Q6PGQ1 229 aaPredicted RBP13.27□□□□□ -0.28
TRO-215ENST00000445561 ECHDC2Q86YB7 292 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 ARFGAP1Q8N6T3 406 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 EMC1Q8N766 993 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 ANKLE1Q8NAG6 615 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 TRABDQ9H4I3 376 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 SLCO1B3Q9NPD5 702 aa13.27□□□□□ -0.28
TRO-215ENST00000445561 A0A1W2PPM1 405 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 SOWAHBA6NEL2 793 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 C3orf70A6NLC5 250 aaPredicted RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 A8MUI8 341 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 OGTO15294 1046 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 B4GALT5O43286 388 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 ASMTLO95671 621 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 KRT19P08727 400 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 CD48P09326 243 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 HOXC6P09630 235 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 NQO1P15559 274 aaKnown RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 RPA3P35244 121 aaPredicted RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 CDH8P55286 799 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 MORF4L2Q15014 288 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 ANKRD22Q5VYY1 191 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 TMEM192Q8IY95 271 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 PRCCQ92733 491 aaPredicted RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 KLHL29Q96CT2 875 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 RXFP1Q9HBX9 757 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 KLHL14Q9P2G3 628 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 CPSF3Q9UKF6 684 aaKnown RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 SIP14410 1827 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 CFAP73A6NFT4 308 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 ABLIM1O14639 778 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 NRLP54845 237 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 HSDL1Q3SXM5 330 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 NCAPG2Q86XI2 1143 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 RHPN2Q8IUC4 686 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 RIBC1Q8N443 379 aaPredicted RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 GPATCH11Q8N954 259 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 CHST13Q8NET6 341 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 ACTL9Q8TC94 416 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 NLRP4Q96MN2 994 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 TTC25Q96NG3 672 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 FOXP3Q9BZS1 431 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 DRG1Q9Y295 367 aaKnown RBP13.27□□□□□ -0.29
TRO-215ENST00000445561 STK38LQ9Y2H1 464 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 CEP83Q9Y592 693 aa13.27□□□□□ -0.29
TRO-215ENST00000445561 CST8O60676 142 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 LRCH4O75427 683 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 ARIH2O95376 493 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 ITGAVP06756 1048 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 KRT16P08779 473 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 KRT3P12035 628 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 EIF4BP23588 611 aaKnown RBP13.26□□□□□ -0.29
TRO-215ENST00000445561 MAP2K2P36507 400 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
TRO-215ENST00000445561 GPX6P59796 221 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 SLC25A11Q02978 314 aaKnown RBP13.26□□□□□ -0.29
TRO-215ENST00000445561 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
TRO-215ENST00000445561 MAPK6Q16659 721 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 MSS51Q4VC12 460 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 WLSQ5T9L3 541 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 FAM160B1Q5W0V3 765 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 CENPUQ71F23 418 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 SEPT1Q8WYJ6 367 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 NKD2Q969F2 451 aaPredicted RBP13.26□□□□□ -0.29
TRO-215ENST00000445561 PCDH9Q9HC56 1237 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 PCSK1NQ9UHG2 260 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 ALOX15BO15296 676 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 SSTR1P30872 391 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 EFNA5P52803 228 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 AP3M2P53677 418 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 TFDP1Q14186 410 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 TAF5Q15542 800 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 SLC1A5Q15758 541 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 HIF1AQ16665 826 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 CCDC142Q17RM4 750 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 FNBP1LQ5T0N5 605 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 GBP7Q8N8V2 638 aaPredicted RBP13.26□□□□□ -0.29
TRO-215ENST00000445561 SLC35B2Q8TB61 432 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 DENND1AQ8TEH3 1009 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 SMC6Q96SB8 1091 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 ZNF518BQ9C0D4 1074 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 DDX56Q9NY93 547 aaKnown RBP13.26□□□□□ -0.29
TRO-215ENST00000445561 L3MBTL1Q9Y468 752 aa13.26□□□□□ -0.29
TRO-215ENST00000445561 CLUHO75153 1309 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 TCRBV7S3A2A0A539 114 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 INO80B-WBP1J3KQ70 363 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 CA4P22748 312 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
TRO-215ENST00000445561 LBX2Q6XYB7 198 aa13.25□□□□□ -0.29
TRO-215ENST00000445561 CEP128Q6ZU80 1094 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms