RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 LRRC32Q14392 662 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 ANKRD1Q15327 319 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 CSRP2Q16527 193 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 TPGS2Q68CL5 300 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 HEATR6Q6AI08 1181 aaKnown RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 C1orf228Q6PIY5 440 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 CD300LGQ6UXG3 332 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 DIS3L2Q8IYB7 885 aaKnown RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 TCEAL8Q8IYN2 117 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 SPEM1Q8N4L4 309 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 LEMD2Q8NC56 503 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 C3orf58Q8NDZ4 430 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 DDX1Q92499 740 aaKnown RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 KIFAP3Q92845 792 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 TNFRSF25Q93038 417 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 CCDC97Q96F63 343 aaPredicted RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 ZSWIM3Q96MP5 696 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 ACAP3Q96P50 834 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 MTMR9Q96QG7 549 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 SLC30A3Q99726 388 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 TCHPQ9BT92 498 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 POLR3CQ9BUI4 534 aaPredicted RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 GPR88Q9GZN0 384 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 CCDC113Q9H0I3 377 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 POLD4Q9HCU8 107 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 DMGDHQ9UI17 866 aaKnown RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 FBXL5Q9UKA1 691 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 TPCN1Q9ULQ1 816 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 INSL5Q9Y5Q6 135 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 PATJQ8NI35 1801 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 FRYLO94915 3013 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 CTDNEP1O95476 244 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 EDN1P05305 212 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 CHRNB1P11230 501 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 F5P12259 2224 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 CPB1P15086 417 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 RPA1P27694 616 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 RPL9P32969 192 aaKnown RBP8.67□□□□□ -1.02
LINC02549-201ENST00000445346 MCM4P33991 863 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 CCR2P41597 374 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 TYRO3Q06418 890 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 SOX4Q06945 474 aaPredicted RBP8.67□□□□□ -1.02
LINC02549-201ENST00000445346 DMWDQ09019 674 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 SRSF5Q13243 272 aaKnown RBP8.67□□□□□ -1.02
LINC02549-201ENST00000445346 TEAD2Q15562 447 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 ZNF568Q3ZCX4 644 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 AASDHQ4L235 1098 aaPredicted RBP8.67□□□□□ -1.02
LINC02549-201ENST00000445346 NT5DC1Q5TFE4 455 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 ARID2Q68CP9 1835 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 ZNF280DQ6N043 979 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 LONP2Q86WA8 852 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 MFSD6LQ8IWD5 586 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 C12orf50Q8NA57 414 aaPredicted RBP8.67□□□□□ -1.02
LINC02549-201ENST00000445346 APPL2Q8NEU8 664 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 E2F7Q96AV8 911 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 MSANTD3Q96H12 275 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 SAP130Q9H0E3 1048 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 TMEM60Q9H2L4 133 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 C8orf33Q9H7E9 229 aaPredicted RBP8.67□□□□□ -1.02
LINC02549-201ENST00000445346 AFF4Q9UHB7 1163 aaKnown RBP8.67□□□□□ -1.02
LINC02549-201ENST00000445346 MAFFQ9ULX9 164 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 TNFSF13BQ9Y275 285 aa8.67□□□□□ -1.02
LINC02549-201ENST00000445346 SLC38A8A6NNN8 435 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 CHADO15335 359 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 HARSP12081 509 aaKnown RBP8.66□□□□□ -1.02
LINC02549-201ENST00000445346 EPHB3P54753 998 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 MLLT6P55198 1093 aaPredicted RBP8.66□□□□□ -1.02
LINC02549-201ENST00000445346 PEX3P56589 373 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 MRPL58Q14197 206 aaKnown RBP8.66□□□□□ -1.02
LINC02549-201ENST00000445346 SAFBQ15424 915 aaKnown RBP eCLIP8.66□□□□□ -1.02
LINC02549-201ENST00000445346 ZNF174Q15697 407 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 DGKKQ5KSL6 1271 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 HAUS3Q68CZ6 603 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 ALKAL1Q6UXT8 129 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 HAUS6Q7Z4H7 955 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 CEP120Q8N960 986 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 NECAB1Q8N987 351 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 TTC8Q8TAM2 541 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 MDFIQ99750 246 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 ACO2Q99798 780 aaKnown RBP8.66□□□□□ -1.02
LINC02549-201ENST00000445346 MRPL4Q9BYD3 311 aaKnown RBP8.66□□□□□ -1.02
LINC02549-201ENST00000445346 CDT1Q9H211 546 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 BHMT2Q9H2M3 363 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 TRPV4Q9HBA0 871 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 RBM12Q9NTZ6 932 aaKnown RBP8.66□□□□□ -1.02
LINC02549-201ENST00000445346 CEP72Q9P209 647 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 ANGPTL2Q9UKU9 493 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 NOTCH4Q99466 2003 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 VWA8A3KMH1 1905 aa8.66□□□□□ -1.02
LINC02549-201ENST00000445346 PHLPP2Q6ZVD8 1323 aa8.65□□□□□ -1.02
LINC02549-201ENST00000445346 MOSPD3O75425 235 aa8.65□□□□□ -1.02
LINC02549-201ENST00000445346 OR52Z1P0C646 297 aa8.65□□□□□ -1.02
LINC02549-201ENST00000445346 MCF2P10911 925 aa8.65□□□□□ -1.02
LINC02549-201ENST00000445346 FDPSP14324 419 aaKnown RBP8.65□□□□□ -1.02
LINC02549-201ENST00000445346 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.02
LINC02549-201ENST00000445346 ALDH1A3P47895 512 aa8.65□□□□□ -1.02
LINC02549-201ENST00000445346 SOX9P48436 509 aa8.65□□□□□ -1.02
LINC02549-201ENST00000445346 YWHAHQ04917 246 aaPredicted RBP8.65□□□□□ -1.02
LINC02549-201ENST00000445346 DMP1Q13316 513 aaPredicted RBP8.65□□□□□ -1.02
LINC02549-201ENST00000445346 PLD1Q13393 1074 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms