RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ATL2Q8NHH9 583 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 ATP6V1G3Q96LB4 118 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 CCDC114Q96M63 670 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 CPXM1Q96SM3 734 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 TRIM6Q9C030 488 aaPredicted RBP14.45□□□□□ -0.1
RBM39-216ENST00000444878 TMBIM4Q9HC24 238 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 NMRK2Q9NPI5 230 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 WDR35Q9P2L0 1181 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 SIGLEC16A6NMB1 481 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 M0QYV0 167 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 HMGCRP04035 888 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 KRT1P04264 644 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 MYL3P08590 195 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 DARSP14868 501 aaKnown RBP14.45□□□□□ -0.1
RBM39-216ENST00000444878 TCF4P15884 667 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 RFC1P35251 1148 aaPredicted RBP14.45□□□□□ -0.1
RBM39-216ENST00000444878 RGS2P41220 211 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 PSEN2P49810 448 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 NDST1P52848 882 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 INCA1Q0VD86 236 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 CNGA2Q16280 664 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 CCNG2Q16589 344 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 SYDE1Q6ZW31 735 aaPredicted RBP14.45□□□□□ -0.1
RBM39-216ENST00000444878 NIPA2Q8N8Q9 360 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 DNAJB3Q8WWF6 145 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 EIF2AQ9BY44 585 aaKnown RBP14.45□□□□□ -0.1
RBM39-216ENST00000444878 FAM129AQ9BZQ8 928 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 AP5M1Q9H0R1 490 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 FAM124BQ9H5Z6 455 aaPredicted RBP14.45□□□□□ -0.1
RBM39-216ENST00000444878 TJP2Q9UDY2 1190 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 ASIC3Q9UHC3 531 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.45□□□□□ -0.1
RBM39-216ENST00000444878 R3HDM2Q9Y2K5 976 aaKnown RBP14.45□□□□□ -0.1
RBM39-216ENST00000444878 DERAQ9Y315 318 aa14.45□□□□□ -0.1
RBM39-216ENST00000444878 PI4K2BG5E9Z4 385 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 PSMA2P25787 234 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 C17orf99Q6UX52 265 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 ART4Q93070 314 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 SLITRK1Q96PX8 696 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 CAPS2Q9BXY5 557 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 PABPC3Q9H361 631 aaKnown RBP14.44□□□□□ -0.1
RBM39-216ENST00000444878 ATF7P17544 494 aaPredicted RBP14.44□□□□□ -0.1
RBM39-216ENST00000444878 BEX3Q00994 111 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 IFFO1Q0D2I5 559 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 KAZNQ674X7 775 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 ANKS1BQ7Z6G8 1248 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 USP6NLQ92738 828 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 SNX27Q96L92 541 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 ZMAT2Q96NC0 199 aaKnown RBP14.44□□□□□ -0.1
RBM39-216ENST00000444878 NT5C1AQ9BXI3 368 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 CXCL16Q9H2A7 254 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 DDX56Q9NY93 547 aaKnown RBP14.44□□□□□ -0.1
RBM39-216ENST00000444878 WHRNQ9P202 907 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 HES2Q9Y543 173 aa14.44□□□□□ -0.1
RBM39-216ENST00000444878 TREHO43280 583 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 TJP3O95049 919 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 ERBB2P04626 1255 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 NR1D1P20393 614 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 GPD2P43304 727 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 EIF3BP55884 814 aaKnown RBP14.43□□□□□ -0.1
RBM39-216ENST00000444878 GSCP56915 257 aaPredicted RBP14.43□□□□□ -0.1
RBM39-216ENST00000444878 PDCLQ13371 301 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 PTK6Q13882 451 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 HIC1Q14526 733 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 ZNF268Q14587 947 aaPredicted RBP14.43□□□□□ -0.1
RBM39-216ENST00000444878 SLMAPQ14BN4 828 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 ZSCAN26Q16670 478 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 MFSD7Q6UXD7 560 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 XYLT1Q86Y38 959 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 IFNL1Q8IU54 200 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 BEST2Q8NFU1 509 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 JOSD2Q8TAC2 188 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 FNIP1Q8TF40 1166 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 FAM118BQ9BPY3 351 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 METTL5Q9NRN9 209 aaKnown RBP14.43□□□□□ -0.1
RBM39-216ENST00000444878 KIAA1257Q9ULG3 409 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 SNX9Q9Y5X1 595 aa14.43□□□□□ -0.1
RBM39-216ENST00000444878 HAS3O00219 553 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 SHOX2O60902 331 aaPredicted RBP14.42□□□□□ -0.1
RBM39-216ENST00000444878 KRT10P13645 584 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 ITIH2P19823 946 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 AXLP30530 894 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 COPS2P61201 443 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 ADAM17P78536 824 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 SKOR1P84550 965 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 KRT71Q3SY84 523 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 DENND2CQ68D51 928 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 TXNRD3NBQ6F5E7 133 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 RGMBQ6NW40 437 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 HS6ST3Q8IZP7 471 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 UBA3Q8TBC4 463 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 IPO4Q8TEX9 1081 aaKnown RBP14.42□□□□□ -0.1
RBM39-216ENST00000444878 SOCS4Q8WXH5 440 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 SNF8Q96H20 258 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 APBA2Q99767 749 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 KATNAL1Q9BW62 490 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 APOL6Q9BWW8 343 aa14.42□□□□□ -0.1
RBM39-216ENST00000444878 NXF3Q9H4D5 531 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms