RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TRIM51Q9BSJ1 452 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 HMGXB4Q9UGU5 601 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 FAM153AQ9UHL3 310 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 SNX9Q9Y5X1 595 aa16.57■□□□□ 0.24
SNX13-204ENST00000444712 SYF2O95926 243 aaKnown RBP16.56■□□□□ 0.24
SNX13-204ENST00000444712 GPD2P43304 727 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 TAS2R40P59535 323 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 NOGQ13253 232 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 UBXN11Q5T124 520 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 CYP4A22Q5TCH4 519 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 TSEN2Q8NCE0 465 aaKnown RBP16.56■□□□□ 0.24
SNX13-204ENST00000444712 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 FMO2Q99518 471 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 APOL6Q9BWW8 343 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 DPH5Q9H2P9 285 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 VPS18Q9P253 973 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 TUBGCP4Q9UGJ1 667 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 HES2Q9Y543 173 aa16.56■□□□□ 0.24
SNX13-204ENST00000444712 RNF40O75150 1001 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 PTPN7P35236 360 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 PDCLQ13371 301 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 HADHQ16836 314 aaKnown RBP16.55■□□□□ 0.24
SNX13-204ENST00000444712 SV2CQ496J9 727 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 FBXO47Q5MNV8 452 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 TWF2Q6IBS0 349 aaKnown RBP16.55■□□□□ 0.24
SNX13-204ENST00000444712 RPAINQ86UA6 219 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 DDX42Q86XP3 938 aaKnown RBP eCLIP16.55■□□□□ 0.24
SNX13-204ENST00000444712 XYLT1Q86Y38 959 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 SH3GL2Q99962 352 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 OSBPL8Q9BZF1 889 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 CHST12Q9NRB3 414 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 MTRF1LQ9UGC7 380 aaKnown RBP16.55■□□□□ 0.24
SNX13-204ENST00000444712 GABRQQ9UN88 632 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 IPPQ9Y573 584 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 SMIM28A0A1B0GU29 152 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 MYADML2A6NDP7 307 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 AGPSO00116 658 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 PIRO00625 290 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 GAS8O95995 478 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 KRT7P08729 469 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 PSMA2P25787 234 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 TRADDQ15628 312 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 ZFYVE27Q5T4F4 411 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 TTC27Q6P3X3 843 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 LRIG3Q6UXM1 1119 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 SESTD1Q86VW0 696 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 FAM228AQ86W67 206 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 ZDHHC14Q8IZN3 488 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 MCRS1Q96EZ8 462 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 CPXM1Q96SM3 734 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
SNX13-204ENST00000444712 GDAP2Q9NXN4 497 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 TSPAN16Q9UKR8 245 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 FAN1Q9Y2M0 1017 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 CDY2AQ9Y6F7 541 aa16.55■□□□□ 0.24
SNX13-204ENST00000444712 TCRBV7S2A1N4TA0A589 114 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 GOLGA8SH3BPF8 625 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 GJB6O95452 261 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 KRT1P04264 644 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 RALAP11233 206 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 AKAP5P24588 427 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 TAF6P49848 677 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 LMNB2Q03252 620 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 ZNF252P-AS1Q0IIN9 211 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 NFX1Q12986 1120 aaKnown RBP16.54■□□□□ 0.24
SNX13-204ENST00000444712 KLF1Q13351 362 aaPredicted RBP16.54■□□□□ 0.24
SNX13-204ENST00000444712 ORC1Q13415 861 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 PPP1R7Q15435 360 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 CCNG2Q16589 344 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 IQCKQ8N0W5 287 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 EXOC4Q96A65 974 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 HESX1Q9UBX0 185 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 CYTH4Q9UIA0 394 aa16.54■□□□□ 0.24
SNX13-204ENST00000444712 TJP3O95049 919 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 ERBB2P04626 1255 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 DESP17661 470 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 GLRA4Q5JXX5 417 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 CXCL17Q6UXB2 119 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
SNX13-204ENST00000444712 ZIM3Q96PE6 472 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 TRIM31Q9BZY9 425 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 DCLK3Q9C098 648 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 ARHGAP39Q9C0H5 1083 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 XPNPEP3Q9NQH7 507 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 METTL5Q9NRN9 209 aaKnown RBP16.53■□□□□ 0.24
SNX13-204ENST00000444712 PSD3Q9NYI0 1048 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 RPS6KA5O75582 802 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 PGK1P00558 417 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 FAM163BP0C2L3 166 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
SNX13-204ENST00000444712 GJC1P36383 396 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 PRKCZQ05513 592 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 ARHGAP17Q68EM7 881 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 DPH6Q7L8W6 267 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 SERINC5Q86VE9 423 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 TMEM130Q8N3G9 435 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 ATL2Q8NHH9 583 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 SLITRK1Q96PX8 696 aa16.53■□□□□ 0.24
SNX13-204ENST00000444712 MRPL45Q9BRJ2 306 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms