RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 MRFAP1Q9Y605 127 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 SAR1BQ9Y6B6 198 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 I3L4J1 428 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 HCRTO43612 131 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 NCK2O43639 380 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 ODC1P11926 461 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 PAX3P23760 479 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 RFC2P35250 354 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 AARSP49588 968 aaKnown RBP eCLIP10.07□□□□□ -0.88e-6■■■■■ 52.4
SMPD4P1-203ENST00000443839 DNA2P51530 1060 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 HADHBP55084 474 aaKnown RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TUBB2AQ13885 445 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TCEAL1Q15170 157 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 PTPROQ16827 1216 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TIGD5Q53EQ6 642 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 PPP1R26Q5T8A7 1209 aaPredicted RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 DCLRE1AQ6PJP8 1040 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 PEX26Q7Z412 305 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 ZNF280BQ86YH2 543 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TMEM86AQ8N2M4 240 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 WDTC1Q8N5D0 677 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 UBA3Q8TBC4 463 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TUBB2BQ9BVA1 445 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 MCOLN1Q9GZU1 580 aa10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 MRPL47Q9HD33 250 aaKnown RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 AVENQ9NQS1 362 aaPredicted RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 TIMM13Q9Y5L4 95 aaPredicted RBP10.07□□□□□ -0.8
SMPD4P1-203ENST00000443839 MICAL3Q7RTP6 2002 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 TMEM110-MUSTN1A8MSY1 372 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 MTA2O94776 668 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 DDHD2O94830 711 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 KIF4AO95239 1232 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 TIMP1P01033 207 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 FAM163BP0C2L3 166 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 RAG1P15918 1043 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 ACAT1P24752 427 aaKnown RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 OR1G1P47890 313 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 LHX1P48742 406 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 NUBP1P53384 320 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 PSMC1P62191 440 aaKnown RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 AMPD2Q01433 879 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 DSC1Q08554 894 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 CNKSR3Q6P9H4 555 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 NPAS4Q8IUM7 802 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 CRYBG2Q8N1P7 616 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 B3GALNT2Q8NCR0 500 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 PSMB7Q99436 277 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 ST7Q9NRC1 585 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 PARVAQ9NVD7 372 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 DDX43Q9NXZ2 648 aaKnown RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 CDC23Q9UJX2 597 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 STRIP2Q9ULQ0 834 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 SNX12Q9UMY4 172 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 PACSIN2Q9UNF0 486 aaPredicted RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 SCINQ9Y6U3 715 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 ARHGEF37A1IGU5 675 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 GABRDO14764 452 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 B4GALT3O60512 393 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 SRGAP2O75044 1071 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 ITGB1P05556 798 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 CCDC130P13994 396 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 GPD2P43304 727 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 BRCC3P46736 316 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 GATMP50440 423 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 PTP4A2Q12974 167 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 PDCLQ13371 301 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 MESDQ14696 234 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 RPS6KA1Q15418 735 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 CYP4A22Q5TCH4 519 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 MEI1Q5TIA1 1274 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 C11orf63Q6NUN7 778 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 LLGL2Q6P1M3 1020 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 SLFN11Q7Z7L1 901 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 OSTM1Q86WC4 334 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 METTL23Q86XA0 190 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 COLGALT2Q8IYK4 626 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 MNS1Q8NEH6 495 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 IPO4Q8TEX9 1081 aaKnown RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 LPIN3Q9BQK8 851 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 TLR10Q9BXR5 811 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 MRPL9Q9BYD2 267 aaKnown RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 DNAJB4Q9UDY4 337 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 ANAPC7Q9UJX3 599 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 DSEQ9UL01 958 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 PRG3Q9Y2Y8 225 aaPredicted RBP10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 HYOU1Q9Y4L1 999 aa10.06□□□□□ -0.8
SMPD4P1-203ENST00000443839 TRIM43BA6NCK2 446 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 TBKBP1A7MCY6 615 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 F8W810 466 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 UPP2O95045 317 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 SLU7O95391 586 aaKnown RBP10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 TCP1P17987 556 aaKnown RBP10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 PCSK1P29120 753 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 ADORA2BP29275 332 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 CXCR5P32302 372 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 MAMLD1Q13495 774 aa10.05□□□□□ -0.8
SMPD4P1-203ENST00000443839 PTPN20Q4JDL3 420 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms