RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 TASP1Q9H6P5 420 aa17.8■□□□□ 0.44
IRF3-204ENST00000442265 DDX43Q9NXZ2 648 aaKnown RBP17.8■□□□□ 0.44
IRF3-204ENST00000442265 ABI2Q9NYB9 513 aaPredicted RBP17.8■□□□□ 0.44
IRF3-204ENST00000442265 SNX9Q9Y5X1 595 aa17.8■□□□□ 0.44
IRF3-204ENST00000442265 CACNA1IQ9P0X4 2223 aa17.8■□□□□ 0.44
IRF3-204ENST00000442265 COL4A2P08572 1712 aa17.8■□□□□ 0.44
IRF3-204ENST00000442265 ACTN4O43707 911 aaKnown RBP17.79■□□□□ 0.44
IRF3-204ENST00000442265 PRPF40AO75400 957 aaKnown RBP17.79■□□□□ 0.44
IRF3-204ENST00000442265 TNNC2P02585 160 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 KRT19P08727 400 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 CMA1P23946 247 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 PCSK1P29120 753 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 CASP1P29466 404 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 CUL4BQ13620 913 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 PSMD6Q15008 389 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 GPR158Q5T848 1215 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 FAM171BQ6P995 826 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 C1orf228Q6PIY5 440 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 HS2ST1Q7LGA3 356 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 TMEM150AQ86TG1 271 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 OSTM1Q86WC4 334 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 ADGRF2Q8IZF7 708 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 XXYLT1Q8NBI6 393 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 FAM200AQ8TCP9 573 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 FUBP3Q96I24 572 aaKnown RBP eCLIP17.79■□□□□ 0.44
IRF3-204ENST00000442265 HPDLQ96IR7 371 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 LRRC3BQ96PB8 259 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 BLZF1Q9H2G9 400 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 ZDHHC9Q9Y397 364 aa17.79■□□□□ 0.44
IRF3-204ENST00000442265 KLRC4O43908 158 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 F11P03951 625 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 FAM163BP0C2L3 166 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 RPL10AP62906 217 aaKnown RBP17.78■□□□□ 0.44
IRF3-204ENST00000442265 CYP24A1Q07973 514 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 KNOP1Q1ED39 458 aaKnown RBP17.78■□□□□ 0.44
IRF3-204ENST00000442265 LMBRD2Q68DH5 695 aaPredicted RBP17.78■□□□□ 0.44
IRF3-204ENST00000442265 ZC3H14Q6PJT7 736 aaKnown RBP17.78■□□□□ 0.44
IRF3-204ENST00000442265 TRAPPC11Q7Z392 1133 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 GIPC2Q8TF65 315 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 NOC3LQ8WTT2 800 aaKnown RBP17.78■□□□□ 0.44
IRF3-204ENST00000442265 KBTBD7Q8WVZ9 684 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 NELL1Q92832 810 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 TRMT2BQ96GJ1 504 aaKnown RBP17.78■□□□□ 0.44
IRF3-204ENST00000442265 MYRFLQ96LU7 910 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 IER2Q9BTL4 223 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
IRF3-204ENST00000442265 USP25Q9UHP3 1055 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 GTF3C4Q9UKN8 822 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 HPSEQ9Y251 543 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 PIAS3Q9Y6X2 628 aa17.78■□□□□ 0.44
IRF3-204ENST00000442265 FAM237AA0A1B0GTK4 181 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 LAMTOR5O43504 91 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 MYL1P05976 194 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 CSH1P0DML2 217 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 CSH2P0DML3 217 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 DDX6P26196 483 aaKnown RBP eCLIP17.77■□□□□ 0.44
IRF3-204ENST00000442265 MAGEA11P43364 429 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 AFMP43652 599 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 NLRP12P59046 1061 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 PSMD2Q13200 908 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 TAF12Q16514 161 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 NELFCDQ8IXH7 590 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 CEP57L1Q8IYX8 460 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 GOLGA5Q8TBA6 731 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 PAGE5Q96GU1 130 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 CEP295NLQ96MC4 621 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 GCNAQ96QF7 691 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 CGRRF1Q99675 332 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 PI4K2AQ9BTU6 479 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 SLC46A2Q9BY10 475 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 C8orf33Q9H7E9 229 aaPredicted RBP17.77■□□□□ 0.44
IRF3-204ENST00000442265 SLC39A2Q9NP94 309 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 SPATA6Q9NWH7 488 aaPredicted RBP17.77■□□□□ 0.44
IRF3-204ENST00000442265 SERTAD1Q9UHV2 236 aa17.77■□□□□ 0.44
IRF3-204ENST00000442265 R3HCC1Q9Y3T6 440 aaKnown RBP17.77■□□□□ 0.44
IRF3-204ENST00000442265 OTOGLQ3ZCN5 2332 aa17.77■□□□□ 0.43
IRF3-204ENST00000442265 CLIC2O15247 247 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 NOL4O94818 638 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 PRAMEF12O95522 483 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
IRF3-204ENST00000442265 CST3P01034 146 aaPredicted RBP17.76■□□□□ 0.43
IRF3-204ENST00000442265 WARSP23381 471 aaKnown RBP17.76■□□□□ 0.43
IRF3-204ENST00000442265 ACAT1P24752 427 aaKnown RBP17.76■□□□□ 0.43
IRF3-204ENST00000442265 CYP2F1P24903 491 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 CDR1P51861 262 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 CLDN10P78369 228 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 CYP4F8P98187 520 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 PLCB2Q00722 1185 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 YAF2Q8IY57 180 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 CMTM8Q8IZV2 173 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 RDH13Q8NBN7 331 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 SPRYD3Q8NCJ5 442 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 FAM3CQ92520 227 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 CHRDQ9H2X0 955 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 PRMT8Q9NR22 394 aaPredicted RBP17.76■□□□□ 0.43
IRF3-204ENST00000442265 CDH9Q9ULB4 789 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 GPR179Q6PRD1 2367 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 MIA3Q5JRA6 1907 aa17.76■□□□□ 0.43
IRF3-204ENST00000442265 TCHHQ07283 1943 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms