RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 RNF113AO15541 343 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZW10O43264 779 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SPAG7O75391 227 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SURF6O75683 361 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 KRT36O76013 467 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 NTSR2O95665 410 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 KRT6AP02538 564 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 KRT6BP04259 564 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PABPC4LP0CB38 370 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 PABPC1P11940 636 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZNF18P17022 549 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TAL1P17542 331 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 GNAZP19086 355 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 WEE1P30291 646 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 HSD17B4P51659 736 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 KCNQ1P51787 676 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 EIF3BP55884 814 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 RAB15P59190 212 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 BEX3Q00994 111 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PLCB3Q01970 1234 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TLE2Q04725 743 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ASPHQ12797 758 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SHHQ15465 462 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PTPRNQ16849 979 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 RGS21Q2M5E4 152 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 LETM2Q2VYF4 491 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SYCP2LQ5T4T6 812 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PAPD7Q5XG87 772 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 HAUS3Q68CZ6 603 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZNF746Q6NUN9 644 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 NFRKBQ6P4R8 1299 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TTC23LQ6PF05 361 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ISLR2Q6UXK2 745 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GLYCTKQ8IVS8 523 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZFPM1Q8IX07 1006 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 HACE1Q8IYU2 909 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ELMOD2Q8IZ81 293 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TCAIMQ8N3R3 496 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ENGASEQ8NFI3 743 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PLEKHO2Q8TD55 490 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 BRSK1Q8TDC3 778 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GTF3C2Q8WUA4 911 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 GAB3Q8WWW8 586 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PGBD4Q96DM1 585 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ASIC4Q96FT7 647 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CFAP36Q96G28 342 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TBCBQ99426 244 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PARK7Q99497 189 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 MEIS3Q99687 375 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PTPN18Q99952 460 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ALG1Q9BT22 464 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 HGH1Q9BTY7 390 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 DPH5Q9H2P9 285 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MFSD1Q9H3U5 465 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CUEDC2Q9H467 287 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ABHD10Q9NUJ1 306 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 DDX28Q9NUL7 540 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 KCTD5Q9NXV2 234 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MRPL39Q9NYK5 338 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 VPS51Q9UID3 782 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SNX12Q9UMY4 172 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 POLIQ9UNA4 740 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TFR2Q9UP52 801 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 USP20Q9Y2K6 914 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PCDHA5Q9Y5H7 936 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 REV3LO60673 3130 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CDH23Q9H251 3354 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ARHGEF28Q8N1W1 1705 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 PTPDC1A2A3K4 754 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 FAM25EA8MYX2 175 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 HAT1O14929 419 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 KLHL41O60662 606 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 KCNJ13O60928 360 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MTA2O94776 668 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CYP2C18P33260 490 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 HOXD13P35453 343 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PIK3CAP42336 1068 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 RPL5P46777 297 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 ST13P50502 369 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 MARSP56192 900 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 CTSWP56202 376 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 NUP107P57740 925 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 AP2B1P63010 937 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 NIPAL4Q0D2K0 466 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TBX2Q13207 712 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 PTK2BQ14289 1009 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TOMM20Q15388 145 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PAN2Q504Q3 1202 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 TDRD12Q587J7 1177 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 SPATA1Q5VX52 437 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 EGFLAMQ63HQ2 1017 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SNRNP48Q6IEG0 339 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 UTS2BQ765I0 119 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CROCCP2Q86T23 111 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 HEATR4Q86WZ0 1026 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SPARTQ8N0X7 666 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ADSSL1Q8N142 457 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ANKRD35Q8N283 1001 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 NATD1Q8N6N6 113 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PYROXD1Q8WU10 500 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms