RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 CACNA1BQ00975 2339 aa21.49■■□□□ 1.03
UBE2F-215ENST00000441728 HUS1O60921 280 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 RNF40O75150 1001 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 EPN2O95208 641 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 DRD1P21728 446 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 MYL7Q01449 175 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 POU5F1Q01860 360 aaKnown RBP21.48■■□□□ 1.03
UBE2F-215ENST00000441728 PSMD2Q13200 908 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 ELF2Q15723 593 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 TXNDC8Q6A555 127 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 LRRTM3Q86VH5 581 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 CAMKK1Q8N5S9 505 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 NOC3LQ8WTT2 800 aaKnown RBP21.48■■□□□ 1.03
UBE2F-215ENST00000441728 CACTINQ8WUQ7 758 aaKnown RBP21.48■■□□□ 1.03
UBE2F-215ENST00000441728 USP13Q92995 863 aaPredicted RBP21.48■■□□□ 1.03
UBE2F-215ENST00000441728 HVCN1Q96D96 273 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 KIF2CQ99661 725 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 FAM83CQ9BQN1 747 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 BLOC1S4Q9NUP1 217 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 CCDC39Q9UFE4 941 aa21.48■■□□□ 1.03
UBE2F-215ENST00000441728 ZNF638Q14966 1978 aaKnown RBP21.48■■□□□ 1.03
UBE2F-215ENST00000441728 TRDMT1O14717 391 aaKnown RBP21.47■■□□□ 1.03
UBE2F-215ENST00000441728 AKAP3O75969 853 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 ZNF806P0C7X5 589 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 IFNAR2P48551 515 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 LIMK1P53667 647 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 FBXO43Q4G163 708 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 FSTL4Q6MZW2 842 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 KBTBD6Q86V97 674 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 P2RY13Q9BPV8 354 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 CCSER1Q9C0I3 900 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 MRPL44Q9H9J2 332 aaKnown RBP21.47■■□□□ 1.03
UBE2F-215ENST00000441728 HPS4Q9NQG7 708 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 ANGPTL2Q9UKU9 493 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 CCL26Q9Y258 94 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 PCDHGA5Q9Y5G8 931 aa21.47■■□□□ 1.03
UBE2F-215ENST00000441728 SOBPA7XYQ1 873 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 TISP43B9A030 160 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 EGFP01133 1207 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 F11P03951 625 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 CKMP06732 381 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 ARSAP15289 507 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 TXLNAP40222 546 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 NR1H3Q13133 447 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 LARP1BQ659C4 914 aaKnown RBP21.46■■□□□ 1.03
UBE2F-215ENST00000441728 PKN3Q6P5Z2 889 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 DYMQ7RTS9 669 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 MON1AQ86VX9 555 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 SFR1Q86XK3 245 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 SYCP3Q8IZU3 236 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 FSIP1Q8NA03 581 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 ACDQ96AP0 544 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 TMX3Q96JJ7 454 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 FAM213AQ9BRX8 229 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 DDX43Q9NXZ2 648 aaKnown RBP21.46■■□□□ 1.03
UBE2F-215ENST00000441728 AGAP1Q9UPQ3 857 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.46■■□□□ 1.03
UBE2F-215ENST00000441728 SCN1AP35498 2009 aa21.46■■□□□ 1.03
UBE2F-215ENST00000441728 TRAV19A0A0A6YYK7 116 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 RHOBTB1O94844 696 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 KRT19P08727 400 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 POLR2BP30876 1174 aaKnown RBP21.45■■□□□ 1.02
UBE2F-215ENST00000441728 DDIT3P35638 169 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 MPLP40238 635 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 MTF1Q14872 753 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 STPG1Q5TH74 334 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 BRAPQ7Z569 592 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 SPATA2LQ8IUW3 424 aaPredicted RBP21.45■■□□□ 1.02
UBE2F-215ENST00000441728 EFCAB13Q8IY85 973 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 CCDC26Q8TAB7 109 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 HHIPQ96QV1 700 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 ST6GALNAC4Q9H4F1 302 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 UPF2Q9HAU5 1272 aaKnown RBP21.45■■□□□ 1.02
UBE2F-215ENST00000441728 DUS2Q9NX74 493 aaKnown RBP21.45■■□□□ 1.02
UBE2F-215ENST00000441728 STYXL1Q9Y6J8 313 aa21.45■■□□□ 1.02
UBE2F-215ENST00000441728 TPRP12270 2363 aaKnown RBP21.45■■□□□ 1.02
UBE2F-215ENST00000441728 LDHAP00338 332 aaKnown RBP21.44■■□□□ 1.02
UBE2F-215ENST00000441728 ITGB3P05106 788 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 USP17L7P0C7H9 530 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 HMGA1P17096 107 aaKnown RBP21.44■■□□□ 1.02
UBE2F-215ENST00000441728 HOXC13P31276 330 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 GPR15P49685 360 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 FAM160A1Q05DH4 1040 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 ZNF268Q14587 947 aaPredicted RBP21.44■■□□□ 1.02
UBE2F-215ENST00000441728 SF3A1Q15459 793 aaKnown RBP21.44■■□□□ 1.02
UBE2F-215ENST00000441728 DDR2Q16832 855 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 SDHAF4Q5VUM1 108 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 ZNF720Q7Z2F6 126 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 SCN4BQ8IWT1 228 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 TMEM86AQ8N2M4 240 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 STKLD1Q8NE28 680 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 RPLP0P6Q8NHW5 317 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 LEO1Q8WVC0 666 aaPredicted RBP21.44■■□□□ 1.02
UBE2F-215ENST00000441728 ATP2A3Q93084 1043 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 ACCSQ96QU6 501 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 FIZ1Q96SL8 496 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 ACBD6Q9BR61 282 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 VPS45Q9NRW7 570 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 SEL1LQ9UBV2 794 aa21.44■■□□□ 1.02
UBE2F-215ENST00000441728 GREB1Q4ZG55 1949 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms