RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SPG21Q9NZD8 308 aa5.33□□□□□ -1.56
PTPN4-206ENST00000441089 ZNF215Q9UL58 517 aaPredicted RBP5.33□□□□□ -1.56
PTPN4-206ENST00000441089 WASF3Q9UPY6 502 aa5.33□□□□□ -1.56
PTPN4-206ENST00000441089 CTNND2Q9UQB3 1225 aa5.33□□□□□ -1.56
PTPN4-206ENST00000441089 NEUROG3Q9Y4Z2 214 aa5.33□□□□□ -1.56
PTPN4-206ENST00000441089 PCDHB6Q9Y5E3 794 aa5.33□□□□□ -1.56
PTPN4-206ENST00000441089 IRAK3Q9Y616 596 aa5.33□□□□□ -1.56
PTPN4-206ENST00000441089 MGAQ8IWI9 3026 aa5.33□□□□□ -1.56
PTPN4-206ENST00000441089 SPTBN1Q01082 2364 aaKnown RBP5.33□□□□□ -1.56
PTPN4-206ENST00000441089 ABCB11O95342 1321 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 M0QZ92 97 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 NOP56O00567 594 aaKnown RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 ZNF862O60290 1169 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 CXCL14O95715 111 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 GGPS1O95749 300 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 NTRK1P04629 796 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 LGALS2P05162 132 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 TGFB3P10600 412 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 EPCAMP16422 314 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 ITIH2P19823 946 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 HOXA13P31271 388 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 CD52P31358 61 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 NASPP49321 788 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 KRT85P78386 507 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 ADAM17P78536 824 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 PFKPQ01813 784 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 GHRHRQ02643 423 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 CEBPZQ03701 1054 aaKnown RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 MGAT3Q09327 533 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 PAK2Q13177 524 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 DSC3Q14574 896 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 SAFBQ15424 915 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 MLF2Q15773 248 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 KCNMB1Q16558 191 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 INF2Q27J81 1249 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 COL28A1Q2UY09 1125 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 GALNT17Q6IS24 598 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 SLC23A3Q6PIS1 610 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 C19orf48Q6RUI8 117 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 TSSK4Q6SA08 328 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 KCNT2Q6UVM3 1135 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 FAM214BQ7L5A3 538 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 LINC00301Q8NCQ3 95 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 EPS8L3Q8TE67 593 aaKnown RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 CCDC12Q8WUD4 166 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 LEO1Q8WVC0 666 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 LMBR1Q8WVP7 490 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 HRASLS5Q96KN8 279 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 BBC3Q96PG8 261 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 GBP4Q96PP9 640 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 MYADMQ96S97 322 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 RHOBTB2Q9BYZ6 727 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 TNKS2Q9H2K2 1166 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 PSTPIP2Q9H939 334 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 MLXIPQ9HAP2 919 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 C6orf50Q9HD87 102 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 LTB4R2Q9NPC1 389 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 C1orf112Q9NSG2 853 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 RTEL1Q9NZ71 1219 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 COL20A1Q9P218 1284 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 DPP7Q9UHL4 492 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 RCOR1Q9UKL0 485 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 MRPS17Q9Y2R5 130 aaKnown RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 MSRB2Q9Y3D2 182 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 CDY2AQ9Y6F7 541 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 POLQO75417 2590 aa5.32□□□□□ -1.56
PTPN4-206ENST00000441089 BAZ2BQ9UIF8 2168 aaKnown RBP5.32□□□□□ -1.56
PTPN4-206ENST00000441089 CLUHO75153 1309 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 N4BP1O75113 896 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 PRPF40AO75400 957 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 YEATS4O95619 227 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 LAMP2P13473 410 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 CEACAM1P13688 526 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ATP2B1P20020 1258 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 MAPK1P28482 360 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 GNA11P29992 359 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 HSD17B4P51659 736 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 CCR3P51677 355 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 POLGP54098 1239 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 MRPS6P82932 125 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 GRIN1Q05586 938 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 SNW1Q13573 536 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 GNL2Q13823 731 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 SF3A1Q15459 793 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ZNF174Q15697 407 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 SLC44A4Q53GD3 710 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 RILPL1Q5EBL4 403 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 TTC38Q5R3I4 469 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 AXDND1Q5T1B0 1012 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ARHGEF16Q5VV41 709 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 DAB2IPQ5VWQ8 1189 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 DTHD1Q6ZMT9 781 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 SYDE1Q6ZW31 735 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 ZNF605Q86T29 641 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 TMEFF1Q8IYR6 380 aa5.31□□□□□ -1.56
PTPN4-206ENST00000441089 REXO1Q8N1G1 1221 aaKnown RBP5.31□□□□□ -1.56
PTPN4-206ENST00000441089 LRRC43Q8N309 656 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms