RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 UVRAGQ9P2Y5 699 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 TTC3P53804 2025 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 DDHD2O94830 711 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 WARSP23381 471 aaKnown RBP20.23■□□□□ 0.83
SNX17-203ENST00000440760 RPL9P32969 192 aaKnown RBP20.23■□□□□ 0.83
SNX17-203ENST00000440760 TIGD5Q53EQ6 642 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 NOMO2Q5JPE7 1267 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 C1orf53Q5VUE5 145 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 DSTYKQ6XUX3 929 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 TTC30AQ86WT1 665 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 ABCB6Q9NP58 842 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 TMEM161AQ9NX61 479 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 ATP2C2O75185 946 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 GTF2F1P35269 517 aaKnown RBP eCLIP20.22■□□□□ 0.83
SNX17-203ENST00000440760 TERF1P54274 439 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 RPS6KA1Q15418 735 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 WHAMMP3Q1A5X7 153 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 C11orf63Q6NUN7 778 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 LCLAT1Q6UWP7 414 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 CD300LGQ6UXG3 332 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 ERICH1Q86X53 443 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 ZNF518BQ9C0D4 1074 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 TMEM39AQ9NV64 488 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 TBC1D13Q9NVG8 400 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 HCSTQ9UBK5 93 aa20.22■□□□□ 0.83
SNX17-203ENST00000440760 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.21■□□□□ 0.83
SNX17-203ENST00000440760 TULP2O00295 520 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 PDE2AO00408 941 aaPredicted RBP20.21■□□□□ 0.83
SNX17-203ENST00000440760 PIK3R2O00459 728 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 CXCL10P02778 98 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 PFKMP08237 780 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 ADORA2BP29275 332 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 GPD2P43304 727 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 PDCLQ13371 301 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 MAMLD1Q13495 774 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 ANKLE1Q8NAG6 615 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 URGCPQ8TCY9 931 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 APBB2Q92870 758 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 VCPIP1Q96JH7 1222 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 AMFRQ9UKV5 643 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 ALG6Q9Y672 507 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 KCNK3O14649 394 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 CTIFO43310 598 aaKnown RBP20.21■□□□□ 0.83
SNX17-203ENST00000440760 TADA3O75528 432 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 ERBB2P04626 1255 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 CALB1P05937 261 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 CLTBP09497 229 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 TCP1P17987 556 aaKnown RBP20.21■□□□□ 0.83
SNX17-203ENST00000440760 AARSP49588 968 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNX17-203ENST00000440760 KIAA0319Q5VV43 1072 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 DAB2IPQ5VWQ8 1189 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 PLEKHA7Q6IQ23 1121 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 CREG2Q8IUH2 290 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 MS4A14Q96JA4 679 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 DNAJB4Q9UDY4 337 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 KIAA1257Q9ULG3 409 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 PCDHB7Q9Y5E2 793 aa20.21■□□□□ 0.83
SNX17-203ENST00000440760 COMTP21964 271 aa20.2■□□□□ 0.82
SNX17-203ENST00000440760 TKTP29401 623 aaKnown RBP20.2■□□□□ 0.82
SNX17-203ENST00000440760 MARCKSL1P49006 195 aa20.2■□□□□ 0.82
SNX17-203ENST00000440760 RNASELQ05823 741 aaKnown RBP20.2■□□□□ 0.82
SNX17-203ENST00000440760 TUBB2AQ13885 445 aa20.2■□□□□ 0.82
SNX17-203ENST00000440760 PPP1R2P3Q6NXS1 205 aa20.2■□□□□ 0.82
SNX17-203ENST00000440760 TUBB2BQ9BVA1 445 aa20.2■□□□□ 0.82
SNX17-203ENST00000440760 ST7Q9NRC1 585 aa20.2■□□□□ 0.82
SNX17-203ENST00000440760 DDX43Q9NXZ2 648 aaKnown RBP20.2■□□□□ 0.82
SNX17-203ENST00000440760 GOLGA8SH3BPF8 625 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 RGS7P49802 495 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 RPL7AP62424 266 aaKnown RBP20.19■□□□□ 0.82
SNX17-203ENST00000440760 DSC1Q08554 894 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 DNAJC24Q6P3W2 148 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 CRYBG2Q8N1P7 616 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 B3GALNT2Q8NCR0 500 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 SLC2A14Q8TDB8 520 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 VWCEQ96DN2 955 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 DDX27Q96GQ7 796 aaKnown RBP20.19■□□□□ 0.82
SNX17-203ENST00000440760 HES6Q96HZ4 224 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 MCEEQ96PE7 176 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 SYNCQ9H7C4 482 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 PRDM5Q9NQX1 630 aaPredicted RBP20.19■□□□□ 0.82
SNX17-203ENST00000440760 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.19■□□□□ 0.82
SNX17-203ENST00000440760 TCRBV5S1A1TA0A578 114 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 GABRDO14764 452 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 PRLRP16471 622 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 ITGB8P26012 769 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 PKDCCQ504Y2 493 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 ABI1Q8IZP0 508 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 CEP112Q8N8E3 955 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 KRT35Q92764 455 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 UROC1Q96N76 676 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 PARVAQ9NVD7 372 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 LRFN2Q9ULH4 789 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 PRG3Q9Y2Y8 225 aaPredicted RBP20.19■□□□□ 0.82
SNX17-203ENST00000440760 SCINQ9Y6U3 715 aa20.19■□□□□ 0.82
SNX17-203ENST00000440760 DDX3YO15523 660 aaKnown RBP20.18■□□□□ 0.82
SNX17-203ENST00000440760 OR1G1P47890 313 aa20.18■□□□□ 0.82
SNX17-203ENST00000440760 ARHGAP17Q68EM7 881 aa20.18■□□□□ 0.82
SNX17-203ENST00000440760 COLGALT2Q8IYK4 626 aa20.18■□□□□ 0.82
SNX17-203ENST00000440760 ELAC1Q9H777 363 aaKnown RBP20.18■□□□□ 0.82
SNX17-203ENST00000440760 HESX1Q9UBX0 185 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms