RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ATP2C2O75185 946 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 TACC1O75410 805 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 PDGFRBP09619 1106 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 FAM163BP0C2L3 166 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 ENPEPQ07075 957 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 ZNF699Q32M78 642 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 FAM171BQ6P995 826 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 PSMG2Q969U7 264 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 ELMO3Q96BJ8 720 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 LPIN3Q9BQK8 851 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 SYT15Q9BQS2 421 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 MKNK1Q9BUB5 465 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 SNX25Q9H3E2 840 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 CDH9Q9ULB4 789 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 PIEZO1Q92508 2521 aa25.3■■□□□ 1.64
VARS-217ENST00000440048 NARSO43776 548 aaKnown RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 CD44P16070 742 aaKnown RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 GJA1P17302 382 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 BMP6P22004 513 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 GNL1P36915 607 aaPredicted RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 PLA2G5P39877 138 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 MCCD1P59942 119 aaPredicted RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 PSMC1P62191 440 aaKnown RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 PPP3CAQ08209 521 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 STIM1Q13586 685 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 ZNF667Q5HYK9 610 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 MTSS1LQ765P7 747 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 ITIH5Q86UX2 942 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 ZC3H3Q8IXZ2 948 aaKnown RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 FAM200AQ8TCP9 573 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 GIPC2Q8TF65 315 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 RPP25Q9BUL9 199 aaKnown RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 ZNF334Q9HCZ1 680 aaPredicted RBP25.29■■□□□ 1.64
VARS-217ENST00000440048 ABCB6Q9NP58 842 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 NME7Q9Y5B8 376 aa25.29■■□□□ 1.64
VARS-217ENST00000440048 TRIM49BA6NDI0 452 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 BIN1O00499 593 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 CLSTN1O94985 981 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 HLA-DRAP01903 254 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 EPB41P11171 864 aaKnown RBP25.28■■□□□ 1.64
VARS-217ENST00000440048 CCNE1P24864 410 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 CYP2F1P24903 491 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 GCLMP48507 274 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 LRRC63Q05C16 580 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 MORC3Q14149 939 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 VEPH1Q14D04 833 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 SGSM1Q2NKQ1 1148 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 OR6B3Q8NGW1 331 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 SHKBP1Q8TBC3 707 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 DHTKD1Q96HY7 919 aaPredicted RBP25.28■■□□□ 1.64
VARS-217ENST00000440048 SMYD3Q9H7B4 428 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 CRTAC1Q9NQ79 661 aa25.28■■□□□ 1.64
VARS-217ENST00000440048 PSMA7O14818 248 aa25.27■■□□□ 1.64
VARS-217ENST00000440048 PIK3CAP42336 1068 aa25.27■■□□□ 1.64
VARS-217ENST00000440048 GPR15P49685 360 aa25.27■■□□□ 1.64
VARS-217ENST00000440048 FKBP3Q00688 224 aaKnown RBP25.27■■□□□ 1.64
VARS-217ENST00000440048 SPATA2LQ8IUW3 424 aaPredicted RBP25.27■■□□□ 1.64
VARS-217ENST00000440048 SUGP1Q8IWZ8 645 aaKnown RBP25.27■■□□□ 1.64
VARS-217ENST00000440048 GPR152Q8TDT2 470 aa25.27■■□□□ 1.64
VARS-217ENST00000440048 MMRN2Q9H8L6 949 aa25.27■■□□□ 1.64
VARS-217ENST00000440048 PTPRDP23468 1912 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 A0A1W2PRU2 124 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 PPP1R3GB7ZBB8 358 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 PPP1R2P41236 205 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 CDH8P55286 799 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 TEAD2Q15562 447 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 CFAP221Q4G0U5 840 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 SCARA5Q6ZMJ2 495 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 CLEC17AQ6ZS10 378 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 TAF4BQ92750 862 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 MYLPFQ96A32 169 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 FUBP3Q96I24 572 aaKnown RBP eCLIP25.26■■□□□ 1.63
VARS-217ENST00000440048 ZSWIM3Q96MP5 696 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 KXD1Q9BQD3 176 aa25.26■■□□□ 1.63
VARS-217ENST00000440048 SLC16A3O15427 465 aaKnown RBP25.25■■□□□ 1.63
VARS-217ENST00000440048 ASS1P00966 412 aaKnown RBP25.25■■□□□ 1.63
VARS-217ENST00000440048 SRFP11831 508 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 GTF2H1P32780 548 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 RAP1GAPP47736 663 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 MAPRE1Q15691 268 aaKnown RBP25.25■■□□□ 1.63
VARS-217ENST00000440048 CAMK4Q16566 473 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 SPOPLQ6IQ16 392 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 KLHL10Q6JEL2 608 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 C4orf50Q6ZRC1 276 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 GAREM2Q75VX8 874 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 FBXL6Q8N531 539 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 SDCBP2Q9H190 292 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 DPEP3Q9H4B8 488 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 TMEM8AQ9HCN3 771 aa25.25■■□□□ 1.63
VARS-217ENST00000440048 MAGEC2Q9UBF1 373 aaPredicted RBP25.25■■□□□ 1.63
VARS-217ENST00000440048 A8MXQ7 604 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 FGF19O95750 216 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 PDGFBP01127 241 aaPredicted RBP25.24■■□□□ 1.63
VARS-217ENST00000440048 P4HA1P13674 534 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 GABRR2P28476 465 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 RPL10AP62906 217 aaKnown RBP25.24■■□□□ 1.63
VARS-217ENST00000440048 TAF12Q16514 161 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 DDR2Q16832 855 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 MDH1BQ5I0G3 518 aa25.24■■□□□ 1.63
VARS-217ENST00000440048 FAM78AQ5JUQ0 283 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms