RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 VAMP7P51809 220 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 STX17P56962 302 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 NLRP12P59046 1061 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 RBP5P82980 135 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 DLX2Q07687 328 aaPredicted RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 MRPL58Q14197 206 aaKnown RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 ELOAQ14241 798 aaKnown RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 COL19A1Q14993 1142 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 C1orf220Q5T0J3 134 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 TTI2Q6NXR4 508 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 RSPO2Q6UXX9 243 aaPredicted RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 DSTYKQ6XUX3 929 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 EP400NLQ6ZTU2 488 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 FILIP1Q7Z7B0 1213 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 PALB2Q86YC2 1186 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 WDR49Q8IV35 697 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 ZC3H3Q8IXZ2 948 aaKnown RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 FAM186BQ8IYM0 893 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 MLKLQ8NB16 471 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 VN1R2Q8NFZ6 395 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 PRUNE2Q8WUY3 3088 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 NELFBQ8WX92 580 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 PIK3R5Q8WYR1 880 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 SENP8Q96LD8 212 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 MED15Q96RN5 788 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 CDCA3Q99618 268 aaPredicted RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 CGRRF1Q99675 332 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 EMILIN2Q9BXX0 1053 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 MTMR12Q9C0I1 747 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 CLDND1Q9NY35 253 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 ITGA11Q9UKX5 1188 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 TIMM13Q9Y5L4 95 aaPredicted RBP8.04□□□□□ -1.12
COPS3-203ENST00000439936 HRH3Q9Y5N1 445 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 EYSQ5T1H1 3165 aa8.04□□□□□ -1.12
COPS3-203ENST00000439936 TCF20Q9UGU0 1960 aaKnown RBP8.03□□□□□ -1.12
COPS3-203ENST00000439936 PLXNA3P51805 1871 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 BICDL2A1A5D9 508 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 CYB561D2O14569 222 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 IKBKBO14920 756 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 SYN3O14994 580 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 ADAM12O43184 909 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 TBC1D4O60343 1298 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 GLP2RO95838 553 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 IL2RAP01589 272 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 KRT19P08727 400 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 SPATA31D3P0C874 917 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 EPCAMP16422 314 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 OR1D2P34982 312 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 TAF6P49848 677 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
COPS3-203ENST00000439936 LRRC63Q05C16 580 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 PSMD5Q16401 504 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 LLGL2Q6P1M3 1020 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 PDXDC1Q6P996 788 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 FOXR2Q6PJQ5 311 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 TMEM184AQ6ZMB5 413 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 RBM43Q6ZSC3 357 aaKnown RBP8.03□□□□□ -1.12
COPS3-203ENST00000439936 SPATA31D4Q6ZUB0 917 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 ANKS3Q6ZW76 656 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 PRICKLE2Q7Z3G6 844 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 APPL2Q8NEU8 664 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 TPCN2Q8NHX9 752 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 WHAMMQ8TF30 809 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 MKNK1Q9BUB5 465 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 SRRTQ9BXP5 876 aaKnown RBP8.03□□□□□ -1.12
COPS3-203ENST00000439936 UBE2ZQ9H832 354 aaPredicted RBP8.03□□□□□ -1.12
COPS3-203ENST00000439936 RAB6BQ9NRW1 208 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.03□□□□□ -1.12
COPS3-203ENST00000439936 CLEC1BQ9P126 229 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 TMEM63CQ9P1W3 806 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 COG5Q9UP83 839 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 CTNND2Q9UQB3 1225 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 HCFC2Q9Y5Z7 792 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 BRWD1Q9NSI6 2320 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 DOCK6Q96HP0 2047 aa8.03□□□□□ -1.12
COPS3-203ENST00000439936 CDC14CA4D256 554 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 H7C4K7 107 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 PHACTR2O75167 634 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 OAZ2O95190 189 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 VNN1O95497 513 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 CYP11A1P05108 521 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 EPB41P11171 864 aaKnown RBP8.02□□□□□ -1.13
COPS3-203ENST00000439936 KRT13P13646 458 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 TYMPP19971 482 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 PNPLA4P41247 253 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 CLCN4P51793 760 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 AP3M2P53677 418 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 GDF10P55107 478 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 MYL6P60660 151 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 TFF2Q03403 129 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 SRSF11Q05519 484 aaKnown RBP8.02□□□□□ -1.13
COPS3-203ENST00000439936 PPP3CAQ08209 521 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 BFSP1Q12934 665 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 PAK1Q13153 545 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 RAB33AQ14088 237 aa8.02□□□□□ -1.13
COPS3-203ENST00000439936 ZACNQ401N2 412 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms