RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 LIMS2Q7Z4I7 341 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 YAF2Q8IY57 180 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 IER2Q9BTL4 223 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 CGNQ9P2M7 1197 aaKnown RBP17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 R3HCC1Q9Y3T6 440 aaKnown RBP17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 NUP210Q8TEM1 1887 aaPredicted RBP17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 LMNAP02545 664 aaKnown RBP17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 HMGA1P17096 107 aaKnown RBP17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 PCSK1P29120 753 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 CDR1P51861 262 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 CYP4F8P98187 520 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 SOWAHAQ2M3V2 549 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 CFAP221Q4G0U5 840 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 HS2ST1Q7LGA3 356 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 C12orf56Q8IXR9 622 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 GIPC2Q8TF65 315 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 FAM3CQ92520 227 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 HPDLQ96IR7 371 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 PI4K2AQ9BTU6 479 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 BLZF1Q9H2G9 400 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 R4GN57 208 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 TICRRQ7Z2Z1 1910 aa17.47■□□□□ 0.39
SNRPD3-204ENST00000439775 DPYSL4O14531 572 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 PRAMEF12O95522 483 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 SLFN14P0C7P3 912 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CSH1P0DML2 217 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CSH2P0DML3 217 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 ACAT1P24752 427 aaKnown RBP17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CASP1P29466 404 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CUL4BQ13620 913 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 PSMD6Q15008 389 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 ARHGAP29Q52LW3 1261 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 TMEM150AQ86TG1 271 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 OSTM1Q86WC4 334 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 NELFCDQ8IXH7 590 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 ADSSL1Q8N142 457 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 XXYLT1Q8NBI6 393 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CSGALNACT1Q8TDX6 532 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 FUBP3Q96I24 572 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 LRRC3BQ96PB8 259 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CGRRF1Q99675 332 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 CHRDQ9H2X0 955 aa17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 C8orf33Q9H7E9 229 aaPredicted RBP17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 PRMT8Q9NR22 394 aaPredicted RBP17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 NDRG2Q9UN36 371 aaKnown RBP17.46■□□□□ 0.39
SNRPD3-204ENST00000439775 SOBPA7XYQ1 873 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 ACTN4O43707 911 aaKnown RBP17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 DDX6P26196 483 aaKnown RBP eCLIP17.45■□□□□ 0.381e-7■□□□□ 9.2
SNRPD3-204ENST00000439775 AFMP43652 599 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 CYP2J2P51589 502 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 NLRP12P59046 1061 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 RPL10AP62906 217 aaKnown RBP17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 PLCB2Q00722 1185 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 CYP24A1Q07973 514 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 MAMSTRQ6ZN01 415 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 CMTM8Q8IZV2 173 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 BPIFB1Q8TDL5 484 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 KBTBD7Q8WVZ9 684 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 TRMT2BQ96GJ1 504 aaKnown RBP17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 FNBP1Q96RU3 617 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 SLC46A2Q9BY10 475 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 UXTQ9UBK9 157 aaPredicted RBP17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 GTF3C4Q9UKN8 822 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 PCDHGA2Q9Y5H1 932 aa17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 RIF1Q5UIP0 2472 aaKnown RBP17.45■□□□□ 0.38
SNRPD3-204ENST00000439775 CLIC2O15247 247 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 NOL4O94818 638 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 F11P03951 625 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 DLATP10515 647 aaKnown RBP17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 CYP2F1P24903 491 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 GPR15P49685 360 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 MTAPQ13126 283 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 KNOP1Q1ED39 458 aaKnown RBP17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 FAM171BQ6P995 826 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 TRAPPC11Q7Z392 1133 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 SPATA2LQ8IUW3 424 aaPredicted RBP17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 CELF5Q8N6W0 485 aaKnown RBP17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 SPRYD3Q8NCJ5 442 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 GOLGA5Q8TBA6 731 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 NELL1Q92832 810 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 MYRFLQ96LU7 910 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 SLC39A2Q9NP94 309 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 CDH9Q9ULB4 789 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 FAM186AA6NE01 2351 aa17.44■□□□□ 0.38
SNRPD3-204ENST00000439775 FANCMQ8IYD8 2048 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 F5P12259 2224 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 CACNA1IQ9P0X4 2223 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 MYBPHLA2RUH7 354 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 SLC38A8A6NNN8 435 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 HCRTO43612 131 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 KLRC4O43908 158 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 MYL1P05976 194 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 TNNI1P19237 187 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 WARSP23381 471 aaKnown RBP17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 CMA1P23946 247 aa17.43■□□□□ 0.38
SNRPD3-204ENST00000439775 CCNE1P24864 410 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms