RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 KIAA0319LQ8IZA0 1049 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 ACTRT1Q8TDG2 376 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 DHX33Q9H6R0 707 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 XPNPEP1Q9NQW7 623 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 KLHL14Q9P2G3 628 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 B4GALT5O43286 388 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 PNPLA4P41247 253 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 SLC12A2P55011 1212 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 PDE1BQ01064 536 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 TDRD10Q5VZ19 366 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 SLC27A1Q6PCB7 646 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 GLB1LQ6UWU2 654 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 FAM71AQ8IYT1 594 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 LNX1Q8TBB1 728 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 ATG4AQ8WYN0 398 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 SIK2Q9H0K1 926 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 ARHGAP28Q9P2N2 729 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 NHSQ6T4R5 1651 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 CACNA1SQ13698 1873 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 I3L4J1 428 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 PSEN2P49810 448 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 PTENP60484 403 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 ROR1Q01973 937 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 MAPK7Q13164 816 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 PRPSAP1Q14558 356 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 EFHC2Q5JST6 749 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 NUGGCQ68CJ6 796 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 JADE1Q6IE81 842 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 NT5DC3Q86UY8 548 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 TMEM176AQ96HP8 235 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 ISCUQ9H1K1 167 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 CDT1Q9H211 546 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 RNF19AQ9NV58 838 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 POLIQ9UNA4 740 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 PCDHA2Q9Y5H9 948 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 PABPN1LA6NDY0 278 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 SAT1P21673 171 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 BYSLQ13895 437 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 FSCN1Q16658 493 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 HGSNATQ68CP4 663 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 EMC1Q8N766 993 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 DPF3Q92784 378 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZNF518BQ9C0D4 1074 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 ST6GALNAC4Q9H4F1 302 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 HAUS2Q9NVX0 235 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 KLHL8Q9P2G9 620 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 PROSCO94903 275 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 COILP38432 576 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 NFIL3Q16649 462 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 FAM110CQ1W6H9 321 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 KCNT1Q5JUK3 1230 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 CASKIN2Q8WXE0 1202 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 SEMA4DQ92854 862 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 CAPNS2Q96L46 248 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 YY1AP1Q9H869 796 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 A0A0B4J269 797 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 GPD1P21695 349 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 PCSK1P29120 753 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 ATICP31939 592 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 HEATR6Q6AI08 1181 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 PCGF5Q86SE9 256 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZNF410Q86VK4 478 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 PIK3R5Q8WYR1 880 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 CNOT10Q9H9A5 744 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 MAFBQ9Y5Q3 323 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 BCORQ6W2J9 1755 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 LRP5O75197 1615 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 F5H423 210 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 MT-ND3P03897 115 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 KRT10P13645 584 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 CA4P22748 312 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 IL9RQ01113 521 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 PDIA2Q13087 525 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 PAN2Q504Q3 1202 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZBED8Q8IZ13 594 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 RNPEPQ9H4A4 650 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 DMAC2Q9NW81 257 aa12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 GEMIN8Q9NWZ8 242 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-202ENST00000438773 LSM8O95777 96 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 RBP3P10745 1247 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 EIF4BP23588 611 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 DCAF6Q58WW2 860 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 FBXO47Q5MNV8 452 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 C11orf63Q6NUN7 778 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 SRRM1Q8IYB3 904 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 LRRC8CQ8TDW0 803 aa12.13□□□□□ -0.47
TRAPPC9-202ENST00000438773 ZNF473Q8WTR7 871 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms