RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 EFCAB13Q8IY85 973 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 SLC35F6Q8N357 371 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 PPM1KQ8N3J5 372 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 TTC39CQ8N584 583 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 SLC43A3Q8NBI5 491 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 LNX1Q8TBB1 728 aaPredicted RBP8.18□□□□□ -1.1
HMGB2-202ENST00000438704 DDX1Q92499 740 aaKnown RBP8.18□□□□□ -1.1
HMGB2-202ENST00000438704 KAT5Q92993 513 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 ACAP3Q96P50 834 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 NOX5Q96PH1 765 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 TRAIPQ9BWF2 469 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 CELF4Q9BZC1 486 aaKnown RBP8.18□□□□□ -1.1
HMGB2-202ENST00000438704 IMPG2Q9BZV3 1241 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 UBE2OQ9C0C9 1292 aaKnown RBP8.18□□□□□ -1.1
HMGB2-202ENST00000438704 NIF3L1Q9GZT8 377 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 APOBEC3GQ9HC16 384 aaKnown RBP8.18□□□□□ -1.1
HMGB2-202ENST00000438704 CHST12Q9NRB3 414 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 GUCA1BQ9UMX6 200 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 JRKLQ9Y4A0 524 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 PCDHB2Q9Y5E7 798 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 SQORQ9Y6N5 450 aa8.18□□□□□ -1.1
HMGB2-202ENST00000438704 TRIP12Q14669 1992 aaPredicted RBP8.18□□□□□ -1.1
HMGB2-202ENST00000438704 RALGAPA2Q2PPJ7 1873 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 ANKRD62A6NC57 917 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 LACTBL1A8MY62 500 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 MTA2O94776 668 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 PGK1P00558 417 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 H2AFB1P0C5Y9 115 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 H2AFB2P0C5Z0 115 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 TMEM191BP0C7N4 346 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CXCL8P10145 99 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 KCNE1P15382 129 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CYP11B1P15538 503 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CHRNB2P17787 502 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 TNFAIP3P21580 790 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CCND3P30281 292 aaPredicted RBP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 YWHAEP62258 255 aaKnown RBP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 MRPS6P82932 125 aaKnown RBP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 FMO1Q01740 532 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 ARID5AQ03989 594 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 MGAT3Q09327 533 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 BIRC3Q13489 604 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 ZBTB6Q15916 424 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 IFI16Q16666 785 aaKnown RBP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 ARHGAP44Q17R89 818 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 WHAMMP3Q1A5X7 153 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CXCL17Q6UXB2 119 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 TRIM72Q6ZMU5 477 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CATSPER4Q7RTX7 472 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 SLFN11Q7Z7L1 901 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 RNF180Q86T96 592 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 GLYCTKQ8IVS8 523 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 THNSL1Q8IYQ7 743 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CEP120Q8N960 986 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CD99L2Q8TCZ2 262 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 DNAJB3Q8WWF6 145 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 SNX27Q96L92 541 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 SCLT1Q96NL6 688 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 PSMG3-AS1Q96PY0 264 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CCDC94Q9BW85 323 aaPredicted RBP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 BCO2Q9BYV7 579 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 MTMR12Q9C0I1 747 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 SENP6Q9GZR1 1112 aaPredicted RBP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 FAM49AQ9H0Q0 323 aaPredicted RBP8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CYP3A43Q9HB55 503 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CNTN3Q9P232 1028 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 TRIM10Q9UDY6 481 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 SIX4Q9UIU6 781 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CDC23Q9UJX2 597 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 ITGA11Q9UKX5 1188 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 SLC6A14Q9UN76 642 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 NUB1Q9Y5A7 615 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 TRPV2Q9Y5S1 764 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 CITO14578 2027 aa8.17□□□□□ -1.1
HMGB2-202ENST00000438704 A0A0A0MRY4 1105 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 CES2O00748 559 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 DYNC1I1O14576 645 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 GRIN2DO15399 1336 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 CYP26A1O43174 497 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 PHACTR2O75167 634 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 RTN2O75298 545 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 SLU7O95391 586 aaKnown RBP8.16□□□□□ -1.1
HMGB2-202ENST00000438704 CST3P01034 146 aaPredicted RBP8.16□□□□□ -1.1
HMGB2-202ENST00000438704 CYP1A1P04798 512 aaPredicted RBP8.16□□□□□ -1.1
HMGB2-202ENST00000438704 ASGR1P07306 291 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 FAM163BP0C2L3 166 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 PNMA6AP0CW24 399 aaPredicted RBP8.16□□□□□ -1.1
HMGB2-202ENST00000438704 HARSP12081 509 aaKnown RBP8.16□□□□□ -1.1
HMGB2-202ENST00000438704 CYP3A5P20815 502 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 YY1P25490 414 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 PDE6CP51160 858 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 RAC1P63000 192 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 ZNF200P98182 395 aaPredicted RBP8.16□□□□□ -1.1
HMGB2-202ENST00000438704 NRG1Q02297 640 aaPredicted RBP8.16□□□□□ -1.1
HMGB2-202ENST00000438704 ITIH3Q06033 890 aa8.16□□□□□ -1.1
HMGB2-202ENST00000438704 PTK7Q13308 1070 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms