RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PARP1P09874 1014 aaKnown RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 SRGNP10124 158 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 INSRRP14616 1297 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 MCM7P33993 719 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 TM4SF4P48230 202 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 CASP5P51878 434 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 DGCR2P98153 550 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 LONRF1Q17RB8 773 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 GEN1Q17RS7 908 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 CD300EQ496F6 205 aaPredicted RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 SYCP2LQ5T4T6 812 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 BEND5Q7L4P6 421 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 MRGPREQ86SM8 312 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 FAM186BQ8IYM0 893 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 FAM9AQ8IZU1 332 aaPredicted RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 LCORLQ8N3X6 602 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 ATP11CQ8NB49 1132 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 BRI3BPQ8WY22 251 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 MAML1Q92585 1016 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 TMEM125Q96AQ2 219 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 PTCD3Q96EY7 689 aaKnown RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 LRIG1Q96JA1 1093 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 PPP1R9BQ96SB3 815 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 ADAM2Q99965 735 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 MESP1Q9BRJ9 268 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 ZNF747Q9BV97 191 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 EIF2AQ9BY44 585 aaKnown RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 TTYH3Q9C0H2 523 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 DHX36Q9H2U1 1008 aaKnown RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC2A4RGQ9NR83 387 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 VSX1Q9NZR4 365 aaPredicted RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 TESQ9UGI8 421 aaKnown RBP4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 CORO2BQ9UQ03 480 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 HS3ST4Q9Y661 456 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 LOC102723971A0A1B0GUV8 181 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 POM121BA6NF01 834 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 CCP110O43303 1012 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 SPDEFO95238 335 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 ANXA2P07355 339 aaKnown RBP4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 ADH4P08319 380 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 MYL3P08590 195 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 ZFP36P26651 326 aaKnown RBP4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 CD6P30203 668 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 PPIFP30405 207 aaKnown RBP4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 STT3AP46977 705 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 AVPR1BP47901 424 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 PRIM2P49643 509 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 TOB1P50616 345 aaPredicted RBP4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 NXPH1P58417 271 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 RPS16P62249 146 aaKnown RBP4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 KRT17Q04695 432 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 BIRC2Q13490 618 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 E2F2Q14209 437 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC29A2Q14542 456 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 PLA1AQ53H76 456 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 DCAF12L1Q5VU92 463 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 ICE2Q659A1 982 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 TMEM108Q6UXF1 575 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 RNF44Q7L0R7 432 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 LNX2Q8N448 690 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 GJA10Q969M2 543 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 IQCDQ96DY2 449 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 SNX22Q96L94 193 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 STK31Q9BXU1 1019 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 SERHL2Q9H4I8 314 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 CYP4F11Q9HBI6 524 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 CASS4Q9NQ75 786 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC52A1Q9NWF4 448 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 ITGB1BP2Q9UKP3 347 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 HDAC9Q9UKV0 1011 aa4.59□□□□□ -1.67
LSM1P1-201ENST00000438629 UNC119BA6NIH7 251 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 RASA4BC9J798 803 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 AREL1O15033 823 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 DCLK1O15075 740 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 KPNA5O15131 536 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 RASA4O43374 803 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 MT-ND5P03915 603 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 TXNP10599 105 aaKnown RBP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 EGR2P11161 476 aaPredicted RBP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 CHRM3P20309 590 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 GATA3P23771 443 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 BUD31P41223 144 aaPredicted RBP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 CARSP49589 748 aaKnown RBP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 ALDH5A1P51649 535 aaPredicted RBP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 LILRA4P59901 499 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 ITIH3Q06033 890 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 ABHD18Q0P651 414 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 TP53BP2Q13625 1128 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 BOP1Q14137 746 aaKnown RBP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 PUM1Q14671 1186 aaKnown RBP eCLIP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 RBM20Q5T481 1227 aaKnown RBP4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 USP51Q70EK9 711 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 GPR149Q86SP6 731 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 SRLQ86TD4 932 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 CCDC33Q8N5R6 958 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 B3GALNT2Q8NCR0 500 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 OR56A3Q8NH54 315 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 PARD3BQ8TEW8 1205 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 FAM136AQ96C01 138 aa4.58□□□□□ -1.68
LSM1P1-201ENST00000438629 PGBD1Q96JS3 809 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms