RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 ZNF461Q8TAF7 563 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 SPPL2BQ8TCT7 592 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 BAP1Q92560 729 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 SYN2Q92777 582 aaPredicted RBP19.58■□□□□ 0.72
HDAC6-208ENST00000438518 LRCH3Q96II8 777 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 TWNKQ96RR1 684 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 PKMYT1Q99640 499 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 ELOVL4Q9GZR5 314 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 NSUN3Q9H649 340 aaKnown RBP19.58■□□□□ 0.72
HDAC6-208ENST00000438518 ABCB6Q9NP58 842 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 HMGXB4Q9UGU5 601 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 NME7Q9Y5B8 376 aa19.58■□□□□ 0.72
HDAC6-208ENST00000438518 MED7O43513 233 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 PDGFRBP09619 1106 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 ACAT1P24752 427 aaKnown RBP19.57■□□□□ 0.72
HDAC6-208ENST00000438518 OR1D2P34982 312 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 IRS1P35568 1242 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 ARID5BQ14865 1188 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 GRIN2CQ14957 1233 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 MEA1Q16626 185 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 PTPN21Q16825 1174 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 CFAP221Q4G0U5 840 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 ZNF394Q53GI3 561 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 ACOT1Q86TX2 421 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 ZNF677Q86XU0 584 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 AUTS2Q8WXX7 1259 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 GAS2L1Q99501 681 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-208ENST00000438518 DPEP3Q9H4B8 488 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 PRDM12Q9H4Q4 367 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 AFF4Q9UHB7 1163 aaKnown RBP19.57■□□□□ 0.72
HDAC6-208ENST00000438518 TRIOBPQ9H2D6 2365 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 PTPRDP23468 1912 aa19.57■□□□□ 0.72
HDAC6-208ENST00000438518 HIDE1A8MVS5 230 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 ABLIM3O94929 683 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 ATF2P15336 505 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 KLRC2P26717 231 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 GNA15P30679 374 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 CASP14P31944 242 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 USP8P40818 1118 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 PDE6CP51160 858 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 TBX2Q13207 712 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-208ENST00000438518 SLC39A12Q504Y0 691 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 SGO2Q562F6 1265 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 ARHGAP17Q68EM7 881 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 RSPO2Q6UXX9 243 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-208ENST00000438518 HDAC7Q8WUI4 952 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 HEXIM2Q96MH2 286 aaKnown RBP19.56■□□□□ 0.72
HDAC6-208ENST00000438518 CRTAC1Q9NQ79 661 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 AIPL1Q9NZN9 384 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 GTF3C4Q9UKN8 822 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 PCDHB5Q9Y5E4 795 aa19.56■□□□□ 0.72
HDAC6-208ENST00000438518 TRANK1O15050 2925 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 MTCL1Q9Y4B5 1905 aaKnown RBP19.55■□□□□ 0.72
HDAC6-208ENST00000438518 WDR27A2RRH5 827 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 MYBPHLA2RUH7 354 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 LRRC53A6NM62 1247 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 RFXAPO00287 272 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 GLUD1P00367 558 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 KRT9P35527 623 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 PLXNA3P51805 1871 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 PSMC1P62191 440 aaKnown RBP19.55■□□□□ 0.72
HDAC6-208ENST00000438518 TSR1Q2NL82 804 aaKnown RBP19.55■□□□□ 0.72
HDAC6-208ENST00000438518 SFMBT2Q5VUG0 894 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 SPATA2LQ8IUW3 424 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-208ENST00000438518 DRC7Q8IY82 874 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 CYFIP2Q96F07 1278 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 PCED1BQ96HM7 432 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 CEP295NLQ96MC4 621 aa19.55■□□□□ 0.72
HDAC6-208ENST00000438518 HNRNPABQ99729 332 aaKnown RBP19.55■□□□□ 0.72
HDAC6-208ENST00000438518 BZW2Q9Y6E2 419 aaKnown RBP19.55■□□□□ 0.72
HDAC6-208ENST00000438518 MTMR11A4FU01 709 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 AKR1B15C9JRZ8 316 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-208ENST00000438518 RNF225M0QZC1 329 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-208ENST00000438518 CYP26A1O43174 497 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 HCRTO43612 131 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 MFAP3LO75121 409 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 CD19P15391 556 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 RPL17P18621 184 aaKnown RBP19.54■□□□□ 0.72
HDAC6-208ENST00000438518 HNRNPH3P31942 346 aaKnown RBP19.54■□□□□ 0.72
HDAC6-208ENST00000438518 CLCN1P35523 988 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 PRKCIP41743 596 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 MAGEA11P43364 429 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 FXR1P51114 621 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC6-208ENST00000438518 CLCN4P51793 760 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 ARPP19P56211 112 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 DUSP6Q16828 381 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 MDH1BQ5I0G3 518 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 VSTM1Q6UX27 236 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 CPLX3Q8WVH0 158 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 MYLPFQ96A32 169 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 TMEM209Q96SK2 561 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 PLEKHA4Q9H4M7 779 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 TLE6Q9H808 572 aa19.54■□□□□ 0.72
HDAC6-208ENST00000438518 ADAM12O43184 909 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 NCK2O43639 380 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 ATP2C2O75185 946 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 GFPT2O94808 682 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 OR4Q2P0C623 313 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 SRGAP2BP0DMP2 458 aa19.53■□□□□ 0.72
HDAC6-208ENST00000438518 CYP11B1P15538 503 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms