RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SOX10P56693 466 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 STX1BP61266 288 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 KCNJ2P63252 427 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 GTF2BQ00403 316 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 PKN2Q16513 984 aaKnown RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 MFSD7Q6UXD7 560 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ANO5Q75V66 913 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ZCCHC9Q8N567 271 aaKnown RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 AGAP11Q8TF27 550 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 LRRC15Q8TF66 581 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ZNF606Q8WXB4 792 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 TRIM56Q9BRZ2 755 aaKnown RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 OSBPL7Q9BZF2 842 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 METTL5Q9NRN9 209 aaKnown RBP7□□□□□ -1.29
CSDE1-205ENST00000438362 SYNPO2Q9UMS6 1093 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 TRIM33Q9UPN9 1127 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 AGAP1Q9UPQ3 857 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 FIS1Q9Y3D6 152 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 DUOX1Q9NRD9 1551 aa7□□□□□ -1.29
CSDE1-205ENST00000438362 LSM8O95777 96 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 ADRB2P07550 413 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 RGS7P49802 495 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 THOC5Q13769 683 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 SMAD1Q15797 465 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 NFIL3Q16649 462 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 KRT80Q6KB66 452 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 ACAD11Q709F0 780 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 CATSPER4Q7RTX7 472 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 OLFM3Q96PB7 478 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 DNPEPQ9ULA0 475 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 NR2E1Q9Y466 385 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 MYH10P35580 1976 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 PARP4Q9UKK3 1724 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 MYH8P13535 1937 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 OGTO15294 1046 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 TM9SF1O15321 606 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 GRAP2O75791 330 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 ACADSP16219 412 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 DEUP1Q05D60 604 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 PPATQ06203 517 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 ITKQ08881 620 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 CHI3L2Q15782 390 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 LRRC23Q53EV4 343 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 LACTB2Q53H82 288 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 DACT2Q5SW24 774 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 KATNAL2Q8IYT4 538 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 ZNF280CQ8ND82 737 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 PRCCQ92733 491 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 DCPSQ96C86 337 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 TLCD1Q96CP7 247 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 MTMR12Q9C0I1 747 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 SLC12A6Q9UHW9 1150 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 FAF1Q9UNN5 650 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 SCAF8Q9UPN6 1271 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 NUB1Q9Y5A7 615 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 DNM1LO00429 736 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 PFDN1O60925 122 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 KLHL2O95198 593 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 GPD1P21695 349 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 CALB2P22676 271 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 CHKAP35790 457 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 BAG6P46379 1132 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 CCNA1P78396 465 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 AP1B1Q10567 949 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 DYNC1I2Q13409 638 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 CUL3Q13618 768 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 STILQ15468 1287 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 ARL13BQ3SXY8 428 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 IER5Q5VY09 327 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 PRPF39Q86UA1 669 aaKnown RBP6.99□□□□□ -1.29
CSDE1-205ENST00000438362 PALB2Q86YC2 1186 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 ICA1LQ8NDH6 482 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 KIF12Q96FN5 646 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 SPATA33Q96N06 139 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM237Q96Q45 408 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 MRIQ9BWK5 157 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 MYLK2Q9H1R3 596 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 PXMP2Q9NR77 195 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 CISHQ9NSE2 258 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 GRID1Q9ULK0 1009 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 STAP1Q9ULZ2 295 aa6.99□□□□□ -1.29
CSDE1-205ENST00000438362 NKRFO15226 690 aaKnown RBP eCLIP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 CREB3O43889 395 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 UNC5CO95185 931 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 MYL2P10916 166 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 SSTR1P30872 391 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ESRRGP62508 458 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 RBP5P82980 135 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 MED21Q13503 144 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 SEPT6Q14141 434 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PGM5Q15124 567 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 NBPF20Q3BBV1 942 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 BOLA3Q53S33 107 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 DALRD3Q5D0E6 543 aaKnown RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 WASHC2DQ5SRD0 308 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 MROH9Q5TGP6 573 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 DAB2IPQ5VWQ8 1189 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms