RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 TMLHEQ9NVH6 421 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 HCFC1R1Q9NWW0 138 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 CEP72Q9P209 647 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 MAGEC2Q9UBF1 373 aaPredicted RBP17.49■□□□□ 0.39
CTSD-205ENST00000438213 MRPS23Q9Y3D9 190 aaKnown RBP17.49■□□□□ 0.39
CTSD-205ENST00000438213 MYBPHLA2RUH7 354 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 ATP2C2O75185 946 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 ALADP13716 330 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 PTPN1P18031 435 aaKnown RBP17.48■□□□□ 0.39
CTSD-205ENST00000438213 CDH8P55286 799 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 MARSP56192 900 aaKnown RBP17.48■□□□□ 0.39
CTSD-205ENST00000438213 RPL10AP62906 217 aaKnown RBP17.48■□□□□ 0.39
CTSD-205ENST00000438213 NOP14P78316 857 aaKnown RBP17.48■□□□□ 0.39
CTSD-205ENST00000438213 NTHL1P78549 312 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 CCDC183Q5T5S1 534 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 SPOPLQ6IQ16 392 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 SASS6Q6UVJ0 657 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 SCARA5Q6ZMJ2 495 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
CTSD-205ENST00000438213 MYCBPAPQ8TBZ2 947 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 TNIP3Q96KP6 325 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 PKMYT1Q99640 499 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 CRISPLD1Q9H336 500 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 SMYD3Q9H7B4 428 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 ASAH2Q9NR71 780 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 LIMD1Q9UGP4 676 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 COQ4Q9Y3A0 265 aa17.48■□□□□ 0.39
CTSD-205ENST00000438213 PMM2O15305 246 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 MICAL2O94851 1124 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CDR1P51861 262 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 PSMC1P62191 440 aaKnown RBP17.47■□□□□ 0.39
CTSD-205ENST00000438213 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CFAP221Q4G0U5 840 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CBWD6Q4V339 395 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CBWD3Q5JTY5 395 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CBWD5Q5RIA9 395 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 PDZD4Q76G19 769 aaPredicted RBP17.47■□□□□ 0.39
CTSD-205ENST00000438213 GET4Q7L5D6 327 aaPredicted RBP17.47■□□□□ 0.39
CTSD-205ENST00000438213 DNAJB7Q7Z6W7 309 aaPredicted RBP17.47■□□□□ 0.39
CTSD-205ENST00000438213 UNC93AQ86WB7 457 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CREBRFQ8IUR6 639 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 TTC39CQ8N584 583 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 ELMO3Q96BJ8 720 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 MYADMQ96S97 322 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 NIF3L1Q9GZT8 377 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CRTAC1Q9NQ79 661 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.47■□□□□ 0.392e-7■■■■■ 88.1
CTSD-205ENST00000438213 EPS15L1Q9UBC2 864 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 CDH7Q9ULB5 785 aa17.47■□□□□ 0.39
CTSD-205ENST00000438213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.47■□□□□ 0.39
CTSD-205ENST00000438213 C2orf16Q68DN1 1984 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 P4HA2O15460 535 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 HCRTO43612 131 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 SOAT2O75908 522 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 FGF19O95750 216 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 LAMP2P13473 410 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 PTMSP20962 102 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 CYP2F1P24903 491 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 MAGEA11P43364 429 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 RAP1GAPP47736 663 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 FMO5P49326 533 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 CYP27A1Q02318 531 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 VSTM1Q6UX27 236 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 FAM114A1Q8IWE2 563 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 TRIM59Q8IWR1 403 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 TTC9BQ8N6N2 239 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 B3GALNT2Q8NCR0 500 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 SEMA4DQ92854 862 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 PSMG2Q969U7 264 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 NXPE3Q969Y0 559 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 BCO2Q9BYV7 579 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 APOBEC3GQ9HC16 384 aaKnown RBP17.46■□□□□ 0.39
CTSD-205ENST00000438213 IGSF9Q9P2J2 1179 aa17.46■□□□□ 0.39
CTSD-205ENST00000438213 TSC2P49815 1807 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 PI4K2BG5E9Z4 385 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 DCXO43602 365 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 MYL4P12829 197 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 ASPAP45381 313 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 EPHA5P54756 1037 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 KCNH2Q12809 1159 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 MDH1BQ5I0G3 518 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 HS6ST3Q8IZP7 471 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 CRYBG2Q8N1P7 616 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 ITFG1Q8TB96 612 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 FGF13Q92913 245 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 SDCBP2Q9H190 292 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 DNAJC25Q9H1X3 360 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 THAP9Q9H5L6 903 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 FAM124BQ9H5Z6 455 aaPredicted RBP17.45■□□□□ 0.38
CTSD-205ENST00000438213 ANO10Q9NW15 660 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 GDE1Q9NZC3 331 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 VCANP13611 3396 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 DOCK6Q96HP0 2047 aa17.45■□□□□ 0.38
CTSD-205ENST00000438213 AFPP02771 609 aaKnown RBP17.44■□□□□ 0.38
CTSD-205ENST00000438213 CSH1P0DML2 217 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 CSH2P0DML3 217 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 BDNFP23560 247 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 GRIK1P39086 918 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 NDST1P52848 882 aa17.44■□□□□ 0.38
CTSD-205ENST00000438213 SCN4BQ8IWT1 228 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms