RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 LHX1P48742 406 aa16.53■□□□□ 0.24
PTPN13-204ENST00000436978 EMILIN2Q9BXX0 1053 aa16.53■□□□□ 0.24
PTPN13-204ENST00000436978 ANTXR2P58335 489 aa16.53■□□□□ 0.24
PTPN13-204ENST00000436978 KIZQ2M2Z5 673 aa16.53■□□□□ 0.24
PTPN13-204ENST00000436978 SETD3Q86TU7 594 aaPredicted RBP16.52■□□□□ 0.24
PTPN13-204ENST00000436978 IPMKQ8NFU5 416 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 SH2D3AQ9BRG2 576 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 PXMP2Q9NR77 195 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 BCAT1P54687 386 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 HIST2H2ACQ16777 129 aaPredicted RBP16.52■□□□□ 0.24
PTPN13-204ENST00000436978 BOLA3Q53S33 107 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 CYP4A22Q5TCH4 519 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 HIST2H2AA3Q6FI13 130 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 RPAINQ86UA6 219 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 SYNDIG1Q9H7V2 258 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 ETNK1Q9HBU6 452 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 GTPBP10A4D1E9 387 aaKnown RBP16.52■□□□□ 0.24
PTPN13-204ENST00000436978 OGTO15294 1046 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 TBC1D4O60343 1298 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 PREPLQ4J6C6 727 aaPredicted RBP16.52■□□□□ 0.24
PTPN13-204ENST00000436978 HOMEZQ8IX15 550 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 TAAR1Q96RJ0 339 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 FAM205CA6NFA0 338 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 BRD2P25440 801 aaKnown RBP16.52■□□□□ 0.24
PTPN13-204ENST00000436978 C3orf62Q6ZUJ4 267 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 OOSP2Q86WS3 158 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 ERGIC2Q96RQ1 377 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 GID8Q9NWU2 228 aa16.52■□□□□ 0.24
PTPN13-204ENST00000436978 VPS37AQ8NEZ2 397 aa16.52■□□□□ 0.23
PTPN13-204ENST00000436978 LRRC1Q9BTT6 524 aa16.52■□□□□ 0.23
PTPN13-204ENST00000436978 AGPAT5Q9NUQ2 364 aa16.52■□□□□ 0.23
PTPN13-204ENST00000436978 ZRANB3Q5FWF4 1079 aa16.52■□□□□ 0.23
PTPN13-204ENST00000436978 TMCO5AQ8N6Q1 288 aa16.52■□□□□ 0.23
PTPN13-204ENST00000436978 CHP1Q99653 195 aa16.52■□□□□ 0.23
PTPN13-204ENST00000436978 ZNF518BQ9C0D4 1074 aa16.52■□□□□ 0.23
PTPN13-204ENST00000436978 RANBP17Q9H2T7 1088 aaKnown RBP16.52■□□□□ 0.23
PTPN13-204ENST00000436978 H0Y3Z8 333 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 RNASEH1O60930 286 aaKnown RBP16.51■□□□□ 0.23
PTPN13-204ENST00000436978 SNRPAP09012 282 aaKnown RBP16.51■□□□□ 0.23
PTPN13-204ENST00000436978 COMTP21964 271 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 TMED1Q13445 227 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 CNGA3Q16281 694 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 FAM83AQ86UY5 434 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 ADGRF2Q8IZF7 708 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 GRID1Q9ULK0 1009 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 ZDHHC9Q9Y397 364 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 HS6ST3Q8IZP7 471 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 AGR3Q8TD06 166 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 USP33Q8TEY7 942 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 TMEM51Q9NW97 253 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 RPL10AP62906 217 aaKnown RBP16.51■□□□□ 0.23
PTPN13-204ENST00000436978 PDIA6Q15084 440 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 FAM83EQ2M2I3 478 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 TFDP3Q5H9I0 405 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 CENPPQ6IPU0 288 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 UBA3Q8TBC4 463 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 DACH2Q96NX9 599 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 CCDC90BQ9GZT6 254 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 PCMTD2Q9NV79 361 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 MTO1Q9Y2Z2 717 aaKnown RBP16.51■□□□□ 0.23
PTPN13-204ENST00000436978 ZNF185O15231 689 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 F9P00740 461 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 PKD2L2Q9NZM6 624 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
PTPN13-204ENST00000436978 TRIM48Q8IWZ4 208 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 AURKCQ9UQB9 309 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 HEATR9A2RTY3 570 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 CARNS1A5YM72 827 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 PTGER2P43116 358 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 LRRC14Q15048 493 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 ITIH5Q86UX2 942 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 KRCC1Q9NPI7 259 aaPredicted RBP16.51■□□□□ 0.23
PTPN13-204ENST00000436978 ALDH1A2O94788 518 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 PGM1P36871 562 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 SMTNL2Q2TAL5 461 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 CCDC126Q96EE4 140 aa16.51■□□□□ 0.23
PTPN13-204ENST00000436978 LSM8O95777 96 aaKnown RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 ETFBP38117 255 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 ZKSCAN4Q969J2 545 aaPredicted RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 FNTAP49354 379 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 POLE2P56282 527 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 PHKG1Q16816 387 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 WDR24Q96S15 920 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 TARS2Q9BW92 718 aaKnown RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 NPHS2Q9NP85 383 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 AP1G2O75843 785 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 TGFB3P10600 412 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 MEGF6O75095 1541 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 RICTORQ6R327 1708 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 TRPC5OSA6NMA1 111 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 RAB27AP51159 221 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 TERF2Q15554 542 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 GRAMD4Q6IC98 578 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 TSC22D3Q99576 134 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 PRPF18Q99633 342 aaKnown RBP16.5■□□□□ 0.23
PTPN13-204ENST00000436978 ITGA11Q9UKX5 1188 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 RGL2O15211 777 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 NCALDP61601 193 aa16.5■□□□□ 0.23
PTPN13-204ENST00000436978 CRLS1Q9UJA2 301 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms