RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 TMEM35BQ8NCS4 154 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 MSANTD4Q8NCY6 345 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 SLC20A1Q8WUM9 679 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 BCL7CQ8WUZ0 217 aaPredicted RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 PIK3R5Q8WYR1 880 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 NOX5Q96PH1 765 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 C11orf84Q9BUA3 381 aaPredicted RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 LHX5Q9H2C1 402 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.25□□□□□ -0.13
RPE-208ENST00000436630 CHST7Q9NS84 486 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 SEPT11Q9NVA2 429 aaKnown RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 HESX1Q9UBX0 185 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 TIMM13Q9Y5L4 95 aaPredicted RBP14.25□□□□□ -0.13
RPE-208ENST00000436630 BACE2Q9Y5Z0 518 aa14.25□□□□□ -0.13
RPE-208ENST00000436630 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.24□□□□□ -0.13
RPE-208ENST00000436630 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.24□□□□□ -0.13
RPE-208ENST00000436630 LINC01553A4QN01 128 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 DDX3XO00571 662 aaKnown RBP eCLIP14.24□□□□□ -0.136e-10■■■□□ 15.3
RPE-208ENST00000436630 FGF18O76093 207 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 MMEP08473 750 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 PDGFRBP09619 1106 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 CCDC175P0C221 793 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 CHRNB2P17787 502 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 LMO2P25791 158 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 CDH5P33151 784 aaPredicted RBP14.24□□□□□ -0.13
RPE-208ENST00000436630 BMPR1AP36894 532 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 BCAT1P54687 386 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 DSG1Q02413 1049 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 NFE2Q16621 373 aaPredicted RBP14.24□□□□□ -0.13
RPE-208ENST00000436630 CTXN3Q4LDR2 81 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 TAF3Q5VWG9 929 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 C4orf50Q6ZRC1 276 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 GPIHBP1Q8IV16 184 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 TDHQ8IZJ6 230 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 SLC30A5Q8TAD4 765 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 LNX1Q8TBB1 728 aaPredicted RBP14.24□□□□□ -0.13
RPE-208ENST00000436630 MYCBPAPQ8TBZ2 947 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 C2orf15Q8WU43 125 aaKnown RBP14.24□□□□□ -0.13
RPE-208ENST00000436630 TRIM11Q96F44 468 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 HNRNPABQ99729 332 aaKnown RBP14.24□□□□□ -0.13
RPE-208ENST00000436630 RTP3Q9BQQ7 232 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 ZCWPW1Q9H0M4 648 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 DPEP3Q9H4B8 488 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 ACP6Q9NPH0 428 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 MTRRQ9UBK8 725 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 ADAMTS1Q9UHI8 967 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 MSRAQ9UJ68 235 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 NAGPAQ9UK23 515 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 INTUQ9ULD6 942 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 ZKSCAN5Q9Y2L8 839 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 PATJQ8NI35 1801 aa14.24□□□□□ -0.13
RPE-208ENST00000436630 A0A087X0T9 212 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 LCHNA4D1U4 455 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 GOLGA6L9A6NEM1 432 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 M0QYV0 167 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 ZSCAN12O43309 604 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 CYP1A1P04798 512 aaPredicted RBP14.23□□□□□ -0.13
RPE-208ENST00000436630 FAM228BP0C875 321 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 ACAT1P24752 427 aaKnown RBP14.23□□□□□ -0.13
RPE-208ENST00000436630 SNX16P57768 344 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 PSMC1P62191 440 aaKnown RBP14.23□□□□□ -0.13
RPE-208ENST00000436630 CENPCQ03188 943 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 ORC1Q13415 861 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 PSMD5Q16401 504 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 CLEC16AQ2KHT3 1053 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 GOLGA7BQ2TAP0 167 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 MDH1BQ5I0G3 518 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 RTP2Q5QGT7 225 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 ALKBH5Q6P6C2 394 aaKnown RBP14.23□□□□□ -0.13
RPE-208ENST00000436630 FAM171BQ6P995 826 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 CEP57Q86XR8 500 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 OR10T2Q8NGX3 314 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 OLIG1Q8TAK6 271 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 TFAP2BQ92481 460 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 CYFIP2Q96F07 1278 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 SMARCD1Q96GM5 515 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 FUBP3Q96I24 572 aaKnown RBP eCLIP14.23□□□□□ -0.13
RPE-208ENST00000436630 ZNF830Q96NB3 372 aaPredicted RBP14.23□□□□□ -0.13
RPE-208ENST00000436630 TGS1Q96RS0 853 aaKnown RBP14.23□□□□□ -0.13
RPE-208ENST00000436630 PKMYT1Q99640 499 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 VN1R3Q9BXE9 311 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 MIS12Q9H081 205 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 ABCB6Q9NP58 842 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 CYLDQ9NQC7 956 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 TSPAN16Q9UKR8 245 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 NENFQ9UMX5 172 aa14.23□□□□□ -0.13
RPE-208ENST00000436630 A0A1W2PPC1 479 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 TBC1D4O60343 1298 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 RTN2O75298 545 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 MICAL2O94851 1124 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 CA3P07451 260 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 MYBL1P10243 752 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 CTSAP10619 480 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 NSFP46459 744 aaKnown RBP14.22□□□□□ -0.13
RPE-208ENST00000436630 RABGGTBP53611 331 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 ERVK-21P61565 698 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 NOMO3P69849 1222 aa14.22□□□□□ -0.13
RPE-208ENST00000436630 GFPT1Q06210 699 aaPredicted RBP14.22□□□□□ -0.13
RPE-208ENST00000436630 BST2Q10589 180 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms