RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 MATR3P43243 847 aaKnown RBP eCLIP11.75□□□□□ -0.532e-8■■■□□ 16.9
HMGCL-204ENST00000436439 FMO5P49326 533 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 CCZ1BP86790 482 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 CCZ1P86791 482 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-204ENST00000436439 KCNMA1Q12791 1236 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 SYCP1Q15431 976 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 C1orf220Q5T0J3 134 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 TCERG1LQ5VWI1 586 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 PDXDC1Q6P996 788 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 POTEHQ6S545 545 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 APBB1IPQ7Z5R6 666 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-204ENST00000436439 CCDC112Q8NEF3 446 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 PLEKHO2Q8TD55 490 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 FGF13Q92913 245 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 SNX27Q96L92 541 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 UROC1Q96N76 676 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 TCHPQ9BT92 498 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 EDEM3Q9BZQ6 932 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 TTYH3Q9C0H2 523 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 SLC2A4RGQ9NR83 387 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 DLGAP2Q9P1A6 1054 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 CPSF3Q9UKF6 684 aaKnown RBP11.75□□□□□ -0.53
HMGCL-204ENST00000436439 CDH7Q9ULB5 785 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 DAAM1Q9Y4D1 1078 aa11.75□□□□□ -0.53
HMGCL-204ENST00000436439 LRRN2O75325 713 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 GYPCP04921 128 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
HMGCL-204ENST00000436439 ACOT2P49753 483 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 GPC5P78333 572 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 DLG4P78352 724 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 ARID5BQ14865 1188 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 SURF1Q15526 300 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 SEZ6Q53EL9 994 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 GBP6Q6ZN66 633 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 C17orf53Q8N3J3 647 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-204ENST00000436439 ING5Q8WYH8 240 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 C18orf25Q96B23 403 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-204ENST00000436439 CCDC94Q9BW85 323 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-204ENST00000436439 FOXQ1Q9C009 403 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 PLCB1Q9NQ66 1216 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 ARHGEF3Q9NR81 526 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 RBAKQ9NYW8 714 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-204ENST00000436439 FBXL5Q9UKA1 691 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 CAPN11Q9UMQ6 739 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
HMGCL-204ENST00000436439 BACE2Q9Y5Z0 518 aa11.74□□□□□ -0.53
HMGCL-204ENST00000436439 COL4A2P08572 1712 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 WDR27A2RRH5 827 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 LRRIQ3A6PVS8 624 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-204ENST00000436439 PODXLO00592 558 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 XYLBO75191 536 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 POU2F2P09086 479 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 TPM1P09493 284 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 CLTAP09496 248 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 GLULP15104 373 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 AP3M2P53677 418 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 YARSP54577 528 aaKnown RBP11.73□□□□□ -0.53
HMGCL-204ENST00000436439 ROR1Q01973 937 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 PPP3CAQ08209 521 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 CETN1Q12798 172 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 EXOC3L4Q17RC7 722 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 SLC5A9Q2M3M2 681 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 VARS2Q5ST30 1063 aaKnown RBP11.73□□□□□ -0.53
HMGCL-204ENST00000436439 PHLDB3Q6NSJ2 640 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 ANKS3Q6ZW76 656 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 NPAS3Q8IXF0 933 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 NKD2Q969F2 451 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-204ENST00000436439 TMEM8AQ9HCN3 771 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 TOPORSQ9NS56 1045 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-204ENST00000436439 CNTN3Q9P232 1028 aa11.73□□□□□ -0.53
HMGCL-204ENST00000436439 ZFP37Q9Y6Q3 630 aaPredicted RBP11.73□□□□□ -0.53
HMGCL-204ENST00000436439 ZFHX2Q9C0A1 2572 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-204ENST00000436439 AKR1B15C9JRZ8 316 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-204ENST00000436439 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 ABLIM3O94929 683 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 IL18RAPO95256 599 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TRIM49P0CI25 452 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TRIM49CP0CI26 452 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 KCNE1P15382 129 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TRIM21P19474 475 aaKnown RBP11.72□□□□□ -0.53
HMGCL-204ENST00000436439 RFX1P22670 979 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 PON1P27169 355 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 TNFSF9P41273 254 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 STARD6P59095 220 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 MYL7Q01449 175 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 SLC10A6Q3KNW5 377 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 CBWD6Q4V339 395 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 PABPC1LQ4VXU2 614 aaKnown RBP11.72□□□□□ -0.53
HMGCL-204ENST00000436439 CBWD3Q5JTY5 395 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 CBWD5Q5RIA9 395 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 ZBTB41Q5SVQ8 909 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 KRT39Q6A163 491 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 SLC8B1Q6J4K2 584 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 DPY19L2P1Q6NXN4 242 aa11.72□□□□□ -0.53
HMGCL-204ENST00000436439 WDR49Q8IV35 697 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms