RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 SLC44A4Q53GD3 710 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 DPH6Q7L8W6 267 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 PARD3BQ8TEW8 1205 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 KBTBD7Q8WVZ9 684 aa19.62■□□□□ 0.73
HMGN1-207ENST00000436324 NXF1Q9UBU9 619 aaKnown RBP19.62■□□□□ 0.73
HMGN1-207ENST00000436324 H0Y858 1186 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 KIF20AO95235 890 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 TNNC1P63316 161 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 CYP4F8P98187 520 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 DDR2Q16832 855 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 WDR72Q3MJ13 1102 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 GPR158Q5T848 1215 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 LIMS2Q7Z4I7 341 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 SPATA2LQ8IUW3 424 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-207ENST00000436324 SLC9A9Q8IVB4 645 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 FMR1NBQ8N0W7 255 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-207ENST00000436324 SPATA18Q8TC71 538 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 ELMO3Q96BJ8 720 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 CCDC34Q96HJ3 373 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 PKMYT1Q99640 499 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 SYT15Q9BQS2 421 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 MRPL45Q9BRJ2 306 aaKnown RBP19.61■□□□□ 0.73
HMGN1-207ENST00000436324 FOXQ1Q9C009 403 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 GPR88Q9GZN0 384 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 SNX25Q9H3E2 840 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 FAM86C1Q9NVL1 165 aa19.61■□□□□ 0.73
HMGN1-207ENST00000436324 MAGED2Q9UNF1 606 aaPredicted RBP19.61■□□□□ 0.73
HMGN1-207ENST00000436324 MUC6Q6W4X9 2439 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 FGF19O95750 216 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 DCNP07585 359 aaKnown RBP19.6■□□□□ 0.73
HMGN1-207ENST00000436324 WARSP23381 471 aaKnown RBP19.6■□□□□ 0.73
HMGN1-207ENST00000436324 DLG4P78352 724 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 PFKPQ01813 784 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 KCNB1Q14721 858 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 MLF2Q15773 248 aaPredicted RBP19.6■□□□□ 0.73
HMGN1-207ENST00000436324 ARHGAP15Q53QZ3 475 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 TDRD10Q5VZ19 366 aaKnown RBP19.6■□□□□ 0.73
HMGN1-207ENST00000436324 VITQ6UXI7 678 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 SCN4BQ8IWT1 228 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 SMYD4Q8IYR2 804 aaPredicted RBP19.6■□□□□ 0.73
HMGN1-207ENST00000436324 OR6B3Q8NGW1 331 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 SHDQ96IW2 340 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 GCNAQ96QF7 691 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 TRMT61BQ9BVS5 477 aaKnown RBP19.6■□□□□ 0.73
HMGN1-207ENST00000436324 BRD9Q9H8M2 597 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 CDH9Q9ULB4 789 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 FRMD4BQ9Y2L6 1034 aa19.6■□□□□ 0.73
HMGN1-207ENST00000436324 HEPACAM2A8MVW5 462 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 CD72P21854 359 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 GDI1P31150 447 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 GNL1P36915 607 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-207ENST00000436324 PHLDB3Q6NSJ2 640 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 ARID3BQ8IVW6 561 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-207ENST00000436324 ATOH1Q92858 354 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-207ENST00000436324 ERCC4Q92889 916 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-207ENST00000436324 RSPRY1Q96DX4 576 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 PHOX2BQ99453 314 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 IL21Q9HBE4 155 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 CRTAC1Q9NQ79 661 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 HEBP1Q9NRV9 189 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 TRAF3IP3Q9Y228 551 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 SIT1Q9Y3P8 196 aa19.59■□□□□ 0.73
HMGN1-207ENST00000436324 NCANO14594 1321 aa19.58■□□□□ 0.73
HMGN1-207ENST00000436324 C4BPAP04003 597 aaKnown RBP19.58■□□□□ 0.72
HMGN1-207ENST00000436324 PSMC3P17980 439 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 NR2F2P24468 414 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 CDC25CP30307 473 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 ATICP31939 592 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 NUBP1P53384 320 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 STARD6P59095 220 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 RPL10AP62906 217 aaKnown RBP19.58■□□□□ 0.72
HMGN1-207ENST00000436324 CYP27A1Q02318 531 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 NCOA4Q13772 614 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 FAM171BQ6P995 826 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 TPRG1Q6ZUI0 275 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 ALYREFQ86V81 257 aaKnown RBP19.58■□□□□ 0.72
HMGN1-207ENST00000436324 GUF1Q8N442 669 aaKnown RBP19.58■□□□□ 0.72
HMGN1-207ENST00000436324 DTWD2Q8NBA8 298 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 MYLPFQ96A32 169 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 SYAP1Q96A49 352 aaPredicted RBP19.58■□□□□ 0.72
HMGN1-207ENST00000436324 MKNK1Q9BUB5 465 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 XYLT2Q9H1B5 865 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 TRPV4Q9HBA0 871 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 ABCB6Q9NP58 842 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 MAGEC2Q9UBF1 373 aaPredicted RBP19.58■□□□□ 0.72
HMGN1-207ENST00000436324 NME7Q9Y5B8 376 aa19.58■□□□□ 0.72
HMGN1-207ENST00000436324 COL4A3Q01955 1670 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 DPYSL4O14531 572 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 LRRN2O75325 713 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 VNN1O95497 513 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 CSH1P0DML2 217 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 CSH2P0DML3 217 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 HMGA1P17096 107 aaKnown RBP19.57■□□□□ 0.72
HMGN1-207ENST00000436324 AP3M2P53677 418 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 CDH8P55286 799 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 FAM160A1Q05DH4 1040 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 UBXN2BQ14CS0 331 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 ZNF699Q32M78 642 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 MDH1BQ5I0G3 518 aa19.57■□□□□ 0.72
HMGN1-207ENST00000436324 SCARA5Q6ZMJ2 495 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms