RNA–Protein interactions for RNA: ENST00000436041.5

PRAMEF27-201, Transcript of PRAME family member 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF27, Length 1,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF27-201ENST00000436041 SH2D3CQ8N5H7 860 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 SMG8Q8ND04 991 aaKnown RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 NIF3L1Q9GZT8 377 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 VRTNQ9H8Y1 702 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 AGO3Q9H9G7 860 aaKnown RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 ERVK-5Q9HDB9 667 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 PARP2Q9UGN5 583 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 INTUQ9ULD6 942 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 PADI3Q9ULW8 664 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 NENFQ9UMX5 172 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 PCDHB2Q9Y5E7 798 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 CKBP12277 381 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 ALADP13716 330 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 KCNE1P15382 129 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 CARSP49589 748 aaKnown RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 PPP2R2AP63151 447 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 ZNF618Q5T7W0 954 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 ZNF677Q86XU0 584 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 RPUSD2Q8IZ73 545 aaKnown RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 ARMC2Q8NEN0 867 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 BEST2Q8NFU1 509 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 EPS8L1Q8TE68 723 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 U2AF1L4Q8WU68 220 aaKnown RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 SEC14L1Q92503 715 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 ZMAT2Q96NC0 199 aaKnown RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 TRAIPQ9BWF2 469 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 APOL6Q9BWW8 343 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 NOCTQ9UK39 431 aaKnown RBP12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 NFU1Q9UMS0 254 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 AGAP1Q9UPQ3 857 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 PCDHB4Q9Y5E5 795 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 DUSP10Q9Y6W6 482 aa12.97□□□□□ -0.33
PRAMEF27-201ENST00000436041 DNAH12Q6ZR08 3092 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 XPOTO43592 962 aaKnown RBP12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 STAU1O95793 577 aaKnown RBP12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 MYCP01106 439 aaPredicted RBP12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 P4HA1P13674 534 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 PDE6CP51160 858 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 CLNS1AP54105 237 aaKnown RBP12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 CDR2Q01850 454 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 LPIN1Q14693 890 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 SETDB1Q15047 1291 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 NOP9Q86U38 636 aaKnown RBP12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 CCDC26Q8TAB7 109 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 HPDLQ96IR7 371 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 PBKQ96KB5 322 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 CCDC134Q9H6E4 229 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 EPB41L5Q9HCM4 733 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 FAM105AQ9NUU6 356 aa12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.33
PRAMEF27-201ENST00000436041 UMODL1Q5DID0 1318 aa12.96□□□□□ -0.34
PRAMEF27-201ENST00000436041 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CCDC188H7C350 402 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 NEBLO76041 1014 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CD4P01730 458 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 H2AFZP0C0S5 128 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 GZMAP12544 262 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CHRNB2P17787 502 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 POLR2BP30876 1174 aaKnown RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CD52P31358 61 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 SLC7A5Q01650 507 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 KCTD16Q68DU8 428 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 NAIF1Q69YI7 327 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 TTC19Q6DKK2 380 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 TMEM270Q6UE05 265 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 H2AFVQ71UI9 128 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 UBR7Q8N806 425 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 OLIG1Q8TAK6 271 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 SLC20A1Q8WUM9 679 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CASKIN2Q8WXE0 1202 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 DDX1Q92499 740 aaKnown RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CISHQ9NSE2 258 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 SEPT11Q9NVA2 429 aaKnown RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 SLC12A4Q9UP95 1085 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 PLAAQ9Y263 795 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 RPS6KL1Q9Y6S9 549 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 ZNF623O75123 536 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 MOCS3O95396 460 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 ATP6V1G2O95670 118 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 SKIP12755 728 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 ITGA4P13612 1032 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CCNG1P51959 295 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 SEC24CP53992 1094 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 MYO1EQ12965 1108 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 ZNF268Q14587 947 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 MEI1Q5TIA1 1274 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 MRPL10Q7Z7H8 261 aaKnown RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 BCO2Q9BYV7 579 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CXCL16Q9H2A7 254 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 FAM124BQ9H5Z6 455 aaPredicted RBP12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 CYP3A43Q9HB55 503 aa12.95□□□□□ -0.34
PRAMEF27-201ENST00000436041 ACP6Q9NPH0 428 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms