RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 POLR2BP30876 1174 aaKnown RBP11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 PNPLA4P41247 253 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GPR15P49685 360 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CDR1P51861 262 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CASP5P51878 434 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ZNF268Q14587 947 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 POSTNQ15063 836 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 L1TD1Q5T7N2 865 aaKnown RBP11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 FSTL4Q6MZW2 842 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 THEM5Q8N1Q8 247 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 FAM160A2Q8N612 972 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ZSWIM2Q8NEG5 633 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 RASSF8Q8NHQ8 419 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 SPATA18Q8TC71 538 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GIPC2Q8TF65 315 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 POMGNT1Q8WZA1 660 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 TRMT2BQ96GJ1 504 aaKnown RBP11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 MYRFLQ96LU7 910 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CNTNAP3BQ96NU0 1288 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CNTNAP3Q9BZ76 1288 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 L1RE1Q9UN81 338 aa11.8□□□□□ -0.52
SPTLC1P4-201ENST00000435997 SCN1AP35498 2009 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ANK1P16157 1881 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 MYMKA6NI61 221 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GABRDO14764 452 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 NOL4O94818 638 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 RAP1GAPP47736 663 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 LIMK1P53667 647 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CUL4AQ13619 759 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 RUNX3Q13761 415 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 NFE2Q16621 373 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CFAP221Q4G0U5 840 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 INTS6LQ5JSJ4 861 aaKnown RBP11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 HEATR6Q6AI08 1181 aaKnown RBP11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 SCARA3Q6AZY7 606 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 MON1AQ86VX9 555 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 LRRC52Q8N7C0 313 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 MAB21L3Q8N8X9 362 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 STKLD1Q8NE28 680 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ACBD6Q9BR61 282 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 FGFBP2Q9BYJ0 223 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 THG1LQ9NWX6 298 aaKnown RBP11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GDAP2Q9NXN4 497 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 SIX4Q9UIU6 781 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 PCDHB5Q9Y5E4 795 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 SRPRBQ9Y5M8 271 aaKnown RBP11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CLIC4Q9Y696 253 aa11.79□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CACNA1BQ00975 2339 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 FOXD2O60548 495 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ITGB3P05106 788 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CSH1P0DML2 217 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CSH2P0DML3 217 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ARSAP15289 507 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GAP43P17677 238 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GARTP22102 1010 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 AVPR1AP37288 418 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 TSPY1Q01534 308 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 USP4Q13107 963 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 RESTQ13127 1097 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ALCAMQ13740 583 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ZNF77Q15935 545 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 CCDC142Q17RM4 750 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 TXNDC8Q6A555 127 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 DYMQ7RTS9 669 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 LIMS2Q7Z4I7 341 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 OSTM1Q86WC4 334 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 TMEM86AQ8N2M4 240 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GAB3Q8WWW8 586 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 EZH1Q92800 747 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 LOXL4Q96JB6 756 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 FAM84AQ96KN4 292 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 EBF3Q9H4W6 596 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 MRPL44Q9H9J2 332 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GKN1Q9NS71 199 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 TDP1Q9NUW8 608 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 DDX43Q9NXZ2 648 aaKnown RBP11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 UXTQ9UBK9 157 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 ITGA11Q9UKX5 1188 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
SPTLC1P4-201ENST00000435997 GDF9O60383 454 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PRPF40AO75400 957 aaKnown RBP11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 AKAP3O75969 853 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 EPN2O95208 641 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 EGFP01133 1207 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TFAMQ00059 246 aaKnown RBP11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 GRSF1Q12849 480 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 BFSP1Q12934 665 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 MTF1Q14872 753 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 PDGFRLQ15198 375 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TAF12Q16514 161 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 SDHAF4Q5VUM1 108 aa11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 NAIF1Q69YI7 327 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1P4-201ENST00000435997 TOP6BLQ8N6T0 577 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms