RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CCDC175P0C221 793 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 CCDC122Q5T0U0 273 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 C10orf76Q5T2E6 689 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 PPP1R26Q5T8A7 1209 aaPredicted RBP28.1■■■□□ 2.09
TMEM248-205ENST00000433271 DDX53Q86TM3 631 aaKnown RBP28.1■■■□□ 2.09
TMEM248-205ENST00000433271 OR10T2Q8NGX3 314 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 KIAA1524Q8TCG1 905 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 CYFIP2Q96F07 1278 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 LHX5Q9H2C1 402 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 FAM49BQ9NUQ9 324 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 STK39Q9UEW8 545 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 GRXCR1A8MXD5 290 aa28.09■■■□□ 2.09
TMEM248-205ENST00000433271 CYP1A1P04798 512 aaPredicted RBP28.09■■■□□ 2.09
TMEM248-205ENST00000433271 CLEC16AQ2KHT3 1053 aa28.09■■■□□ 2.09
TMEM248-205ENST00000433271 INTS6LQ5JSJ4 861 aaKnown RBP28.09■■■□□ 2.09
TMEM248-205ENST00000433271 FAM109BQ6ICB4 259 aaPredicted RBP28.09■■■□□ 2.09
TMEM248-205ENST00000433271 ANKS3Q6ZW76 656 aa28.09■■■□□ 2.09
TMEM248-205ENST00000433271 B3GALT6Q96L58 329 aa28.09■■■□□ 2.09
TMEM248-205ENST00000433271 LPIN3Q9BQK8 851 aa28.09■■■□□ 2.09
TMEM248-205ENST00000433271 CRTAC1Q9NQ79 661 aa28.09■■■□□ 2.09
TMEM248-205ENST00000433271 CHST7Q9NS84 486 aa28.09■■■□□ 2.09
TMEM248-205ENST00000433271 VWA8A3KMH1 1905 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 LSM8O95777 96 aaKnown RBP28.08■■■□□ 2.09
TMEM248-205ENST00000433271 SOD2P04179 222 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 SSTR3P32745 418 aaPredicted RBP28.08■■■□□ 2.09
TMEM248-205ENST00000433271 TSPY1Q01534 308 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 RTP2Q5QGT7 225 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 FAM171BQ6P995 826 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 MYCBPAPQ8TBZ2 947 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 OXCT2Q9BYC2 517 aaPredicted RBP28.08■■■□□ 2.09
TMEM248-205ENST00000433271 ZNF518BQ9C0D4 1074 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 LUC7LQ9NQ29 371 aaKnown RBP28.08■■■□□ 2.09
TMEM248-205ENST00000433271 TSPAN16Q9UKR8 245 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 PPP2R2CQ9Y2T4 447 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 RWDD3Q9Y3V2 267 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 CEP83Q9Y592 693 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 PCDHA13Q9Y5I0 950 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 KIAA1671Q9BY89 1806 aa28.08■■■□□ 2.09
TMEM248-205ENST00000433271 LAMA2P24043 3122 aaKnown RBP28.07■■■□□ 2.08
TMEM248-205ENST00000433271 MYBPHLA2RUH7 354 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 LINC01553A4QN01 128 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 H7C4K7 107 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 MICAL2O94851 1124 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 UNGP13051 313 aaPredicted RBP28.07■■■□□ 2.08
TMEM248-205ENST00000433271 KRT17Q04695 432 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 CTXN3Q4LDR2 81 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 MDH1BQ5I0G3 518 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 ZNF280DQ6N043 979 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 ZSCAN30Q86W11 494 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 PASD1Q8IV76 773 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 HNRNPABQ99729 332 aaKnown RBP28.07■■■□□ 2.08
TMEM248-205ENST00000433271 TAS2R14Q9NYV8 317 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 OR6C75A6NL08 312 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 FGF18O76093 207 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 CCDC130P13994 396 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 CDH5P33151 784 aaPredicted RBP28.07■■■□□ 2.08
TMEM248-205ENST00000433271 BMP8BP34820 402 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 BMPR1AP36894 532 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 MAGEA1P43355 309 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 PLCB3Q01970 1234 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 MAPRE1Q15691 268 aaKnown RBP28.07■■■□□ 2.08
TMEM248-205ENST00000433271 TMEM35BQ8NCS4 154 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 PKMYT1Q99640 499 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 HERC2P3Q9BVR0 1158 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 ISCUQ9H1K1 167 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 GTF3C4Q9UKN8 822 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 PCDHA11Q9Y5I1 949 aa28.07■■■□□ 2.08
TMEM248-205ENST00000433271 TMCO5BA8MYB1 307 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 RTN2O75298 545 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 MYOGP15173 224 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 NOMO3P69849 1222 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 ACAD10Q6JQN1 1059 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 KIAA1841Q6NSI8 718 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 DENND1BQ6P3S1 775 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 FUKQ8N0W3 1084 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 SLC2A14Q8TDB8 520 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 ZCWPW1Q9H0M4 648 aa28.06■■■□□ 2.08
TMEM248-205ENST00000433271 ZSCAN12O43309 604 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 TBC1D4O60343 1298 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 GOLGA7BQ2TAP0 167 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 NAA35Q5VZE5 725 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 PPP1R2P3Q6NXS1 205 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 LRRTM3Q86VH5 581 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 KLHL23Q8NBE8 558 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 PIK3R5Q8WYR1 880 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 PCED1BQ96HM7 432 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 TMEM209Q96SK2 561 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 PLVAPQ9BX97 442 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 KCND1Q9NSA2 647 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 HESX1Q9UBX0 185 aa28.05■■■□□ 2.08
TMEM248-205ENST00000433271 M0QYV0 167 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 FTLP02792 175 aaPredicted RBP28.04■■■□□ 2.08
TMEM248-205ENST00000433271 DSG1Q02413 1049 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 CENPCQ03188 943 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 CCDC142Q17RM4 750 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 PKDCCQ504Y2 493 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 CCAR2Q8N163 923 aaKnown RBP28.04■■■□□ 2.08
TMEM248-205ENST00000433271 WDTC1Q8N5D0 677 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 ANKRD52Q8NB46 1076 aa28.04■■■□□ 2.08
TMEM248-205ENST00000433271 CPA5Q8WXQ8 436 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms