RNA–Protein interactions for RNA: ENST00000433241.5

UBE2F-208, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 2

Gene UBE2F, Length 803 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-208	ENST00000433241	CDH9	Q9ULB4	789 aa		10.81	□□□□□ -0.68
UBE2F-208	ENST00000433241	PCDHB5	Q9Y5E4	795 aa		10.81	□□□□□ -0.68
UBE2F-208	ENST00000433241	NUMBL	Q9Y6R0	609 aa		10.81	□□□□□ -0.68
UBE2F-208	ENST00000433241	PATJ	Q8NI35	1801 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MYH10	P35580	1976 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MYBPHL	A2RUH7	354 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	PHACTR2	O75167	634 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	ATP2C2	O75185	946 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	CD44	P16070	742 aa	Known RBP	10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	FCAR	P24071	287 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	CDR1	P51861	262 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	PMS1	P54277	932 aa	Known RBP	10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	TNNC1	P63316	161 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	LRRC63	Q05C16	580 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	PPP3CA	Q08209	521 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	NCOA4	Q13772	614 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MORC3	Q14149	939 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MGAT5B	Q3V5L5	792 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	CFAP221	Q4G0U5	840 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	CYP4A22	Q5TCH4	519 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	ANKRD40	Q6AI12	368 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	CLEC17A	Q6ZS10	378 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MTSS1L	Q765P7	747 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	ITIH5	Q86UX2	942 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	SHKBP1	Q8TBC3	707 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MCRS1	Q96EZ8	462 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	FUBP3	Q96I24	572 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MMS19	Q96T76	1030 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	SEPT5	Q99719	369 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	LPIN3	Q9BQK8	851 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	PI4K2A	Q9BTU6	479 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	CRTAC1	Q9NQ79	661 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	GTF3C4	Q9UKN8	822 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	HCN4	Q9Y3Q4	1203 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	MYO15A	Q9UKN7	3530 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	TICRR	Q7Z2Z1	1910 aa		10.8	□□□□□ -0.68
UBE2F-208	ENST00000433241	TRIM49B	A6NDI0	452 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	PPP1R3G	B7ZBB8	358 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	CETN3	O15182	167 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	ECI2	O75521	394 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	ASS1	P00966	412 aa	Known RBP	10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	TRIM49	P0CI25	452 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	TRIM49C	P0CI26	452 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	SRF	P11831	508 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	MYL4	P12829	197 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	KRT13	P13646	458 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	HMGA1	P17096	107 aa	Known RBP	10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	GJA1	P17302	382 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	CCNE1	P24864	410 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	CYP2F1	P24903	491 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	GTF2H1	P32780	548 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	GNL1	P36915	607 aa	Predicted RBP	10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	PPP1R2	P41236	205 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	GPR15	P49685	360 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	SGSM1	Q2NKQ1	1148 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	ZNF699	Q32M78	642 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	FOXR2	Q6PJQ5	311 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	GAREM2	Q75VX8	874 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	MYCBPAP	Q8TBZ2	947 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	TAF4B	Q92750	862 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	MYLPF	Q96A32	169 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	PBXIP1	Q96AQ6	731 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	ELSPBP1	Q96BH3	223 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	EEF2KMT	Q96G04	330 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	ZSWIM3	Q96MP5	696 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	ASB16	Q96NS5	453 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	TSG101	Q99816	390 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	SYT15	Q9BQS2	421 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	SDCBP2	Q9H190	292 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	IL21	Q9HBE4	155 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	SLC2A4RG	Q9NR83	387 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	NXF1	Q9UBU9	619 aa	Known RBP	10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	HELZ	P42694	1942 aa	Known RBP	10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	DMD	P11532	3685 aa		10.79	□□□□□ -0.68
UBE2F-208	ENST00000433241	MIA3	Q5JRA6	1907 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241		A0A1W2PRU2	124 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	SLC16A3	O15427	465 aa	Known RBP	10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	NOL4	O94818	638 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	FGF19	O95750	216 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	PDGFB	P01127	241 aa	Predicted RBP	10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	HLA-DRA	P01903	254 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	PDGFRB	P09619	1106 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	MAGEA11	P43364	429 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	GCLM	P48507	274 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	CDH8	P55286	799 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	PSMC1	P62191	440 aa	Known RBP	10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	FKBP3	Q00688	224 aa	Known RBP	10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	VEPH1	Q14D04	833 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	TEAD2	Q15562	447 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	ZNF667	Q5HYK9	610 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	FAM78A	Q5JUQ0	283 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	ISM2	Q6H9L7	571 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	TANGO2	Q6ICL3	276 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	C4orf50	Q6ZRC1	276 aa		10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.78	□□□□□ -0.68
UBE2F-208	ENST00000433241	FBXL6	Q8N531	539 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms