RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 SYNCQ9H7C4 482 aa20.68■□□□□ 0.9
VRK2-205ENST00000432057 UBQLN1Q9UMX0 589 aaKnown RBP20.68■□□□□ 0.9
VRK2-205ENST00000432057 HMGCRP04035 888 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 CAP1Q01518 475 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 PDCLQ13371 301 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 ATP13A4Q4VNC1 1196 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 CFAP58Q5T655 872 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 TAF2Q6P1X5 1199 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 ANKS1BQ7Z6G8 1248 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 TTC39CQ8N584 583 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 LRRC52Q8N7C0 313 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 EXD1Q8NHP7 514 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 PIK3R5Q8WYR1 880 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 HEMGNQ9BXL5 484 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 FAM124BQ9H5Z6 455 aaPredicted RBP20.67■□□□□ 0.9
VRK2-205ENST00000432057 LRRC19Q9H756 370 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 METTL5Q9NRN9 209 aaKnown RBP20.67■□□□□ 0.9
VRK2-205ENST00000432057 GTF2IRD1Q9UHL9 959 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 PTPN22Q9Y2R2 807 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 SNX24Q9Y343 169 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 IPPQ9Y573 584 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 NME7Q9Y5B8 376 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 THSD7BQ9C0I4 1608 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 SMIM28A0A1B0GU29 152 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 RFC1P35251 1148 aaPredicted RBP20.67■□□□□ 0.9
VRK2-205ENST00000432057 GPD2P43304 727 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 MRPS6P82932 125 aaKnown RBP20.67■□□□□ 0.9
VRK2-205ENST00000432057 SNX1Q13596 522 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 GDF6Q6KF10 455 aaPredicted RBP20.67■□□□□ 0.9
VRK2-205ENST00000432057 C12orf29Q8N999 325 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 SMG8Q8ND04 991 aaKnown RBP20.67■□□□□ 0.9
VRK2-205ENST00000432057 MAIP1Q8WWC4 291 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 ATG4AQ8WYN0 398 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 RUNDC3BQ96NL0 473 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 RUFY1Q96T51 708 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 CHST7Q9NS84 486 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 LCMT1Q9UIC8 334 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 TSPAN16Q9UKR8 245 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 CDY2AQ9Y6F7 541 aa20.67■□□□□ 0.9
VRK2-205ENST00000432057 DNAH12Q6ZR08 3092 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 SIGLEC16A6NMB1 481 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 PI4K2BG5E9Z4 385 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 KRT3P12035 628 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 GSCP56915 257 aaPredicted RBP20.66■□□□□ 0.9
VRK2-205ENST00000432057 PIGHQ14442 188 aaPredicted RBP20.66■□□□□ 0.9
VRK2-205ENST00000432057 GOLGA7BQ2TAP0 167 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 SESTD1Q86VW0 696 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 NIPA2Q8N8Q9 360 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 WNT8BQ93098 351 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 RNF25Q96BH1 459 aaPredicted RBP20.66■□□□□ 0.9
VRK2-205ENST00000432057 SH3GL2Q99962 352 aa20.66■□□□□ 0.9
VRK2-205ENST00000432057 R3HDM2Q9Y2K5 976 aaKnown RBP20.66■□□□□ 0.9
VRK2-205ENST00000432057 KRT1P04264 644 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 PSMA2P25787 234 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 RPL21P46778 160 aaKnown RBP20.65■□□□□ 0.9
VRK2-205ENST00000432057 CACNB2Q08289 660 aaPredicted RBP20.65■□□□□ 0.9
VRK2-205ENST00000432057 KLF1Q13351 362 aaPredicted RBP20.65■□□□□ 0.9
VRK2-205ENST00000432057 FAM47CQ5HY64 1035 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 TXNRD3NBQ6F5E7 133 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 TWF2Q6IBS0 349 aaKnown RBP20.65■□□□□ 0.9
VRK2-205ENST00000432057 LCLAT1Q6UWP7 414 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 ACOT1Q86TX2 421 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 IQCKQ8N0W5 287 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 ARRDC4Q8NCT1 418 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 OSBPL8Q9BZF1 889 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 DCLK3Q9C098 648 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 GOLGA2P5Q9HBQ8 144 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 ZDHHC18Q9NUE0 388 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 GRHL1Q9NZI5 618 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 WDR35Q9P2L0 1181 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 TRPV2Q9Y5S1 764 aa20.65■□□□□ 0.9
VRK2-205ENST00000432057 PODXLO00592 558 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 SEPT4O43236 478 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 CTSHP09668 335 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 RARBP10826 455 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 GABRB2P47870 512 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 SOX4Q06945 474 aaPredicted RBP20.64■□□□□ 0.9
VRK2-205ENST00000432057 ZNF268Q14587 947 aaPredicted RBP20.64■□□□□ 0.9
VRK2-205ENST00000432057 UAP1Q16222 522 aaPredicted RBP20.64■□□□□ 0.9
VRK2-205ENST00000432057 XKR4Q5GH76 650 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 ZFYVE27Q5T4F4 411 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 ZDHHC24Q6UX98 284 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 EMC1Q8N766 993 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 ACSF2Q96CM8 615 aaPredicted RBP20.64■□□□□ 0.9
VRK2-205ENST00000432057 LRRC45Q96CN5 670 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 KIAA1257Q9ULG3 409 aa20.64■□□□□ 0.9
VRK2-205ENST00000432057 M0QZ92 97 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 PIK3R2O00459 728 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 PIRO00625 290 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 AOC2O75106 756 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 ADAMTS4O75173 837 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 ECEL1O95672 775 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 ALDH1A1P00352 501 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 PFKMP08237 780 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 KCNE1P15382 129 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 HSD17B3P37058 310 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 PPP1R26Q5T8A7 1209 aaPredicted RBP20.64■□□□□ 0.89
VRK2-205ENST00000432057 TMC3Q7Z5M5 1100 aa20.64■□□□□ 0.89
VRK2-205ENST00000432057 SLITRK1Q96PX8 696 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms