RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 DDX56Q9NY93 547 aaKnown RBP13.58□□□□□ -0.24
DDX56-204ENST00000431640 GRHL1Q9NZI5 618 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.24
DDX56-204ENST00000431640 KIAA1257Q9ULG3 409 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 ATP8A1Q9Y2Q0 1164 aa13.58□□□□□ -0.24
DDX56-204ENST00000431640 GRIN2DO15399 1336 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 EVPLQ92817 2033 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 STAU1O95793 577 aaKnown RBP13.57□□□□□ -0.24
DDX56-204ENST00000431640 NUDT17P0C025 328 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 CCL5P13501 91 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 RARGP13631 454 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 NR1D1P20393 614 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 SSR1P43307 286 aaKnown RBP13.57□□□□□ -0.24
DDX56-204ENST00000431640 GRIK4Q16099 956 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 C2CD6Q53TS8 623 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 ODF2Q5BJF6 829 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 MARCH8Q5T0T0 291 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 KCTD16Q68DU8 428 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 LRRC31Q6UY01 552 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 HOOK3Q86VS8 718 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 C3orf20Q8ND61 904 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 FBXO25Q8TCJ0 367 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 ZNF333Q96JL9 665 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 ZNF668Q96K58 619 aaPredicted RBP13.57□□□□□ -0.24
DDX56-204ENST00000431640 ACAP3Q96P50 834 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 OSBPL8Q9BZF1 889 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 DCLK3Q9C098 648 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 ITGA11Q9UKX5 1188 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 C2CD2Q9Y426 696 aa13.57□□□□□ -0.24
DDX56-204ENST00000431640 A0A1B0GUA9 196 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 TCRBV5S1A1TA0A578 114 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 SRRM3A6NNA2 597 aaPredicted RBP13.56□□□□□ -0.24
DDX56-204ENST00000431640 ASGR1P07306 291 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 ARF4P18085 180 aaPredicted RBP13.56□□□□□ -0.24
DDX56-204ENST00000431640 PSEN2P49810 448 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 CDR1P51861 262 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 RBP5P82980 135 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 KLF1Q13351 362 aaPredicted RBP13.56□□□□□ -0.24
DDX56-204ENST00000431640 PTK6Q13882 451 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 MFSD10Q14728 455 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 KCNA10Q16322 511 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 DCAF4L1Q3SXM0 396 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 ZNF394Q53GI3 561 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 DENND2CQ68D51 928 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 JADE1Q6IE81 842 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 CEP128Q6ZU80 1094 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 CDR2LQ86X02 465 aaPredicted RBP13.56□□□□□ -0.24
DDX56-204ENST00000431640 WDTC1Q8N5D0 677 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 NIPA2Q8N8Q9 360 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 CEP120Q8N960 986 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 C1orf54Q8WWF1 131 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 SCLT1Q96NL6 688 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 MIS12Q9H081 205 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 SIX4Q9UIU6 781 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 ANK1P16157 1881 aa13.56□□□□□ -0.24
DDX56-204ENST00000431640 MKI67P46013 3256 aaKnown RBP13.56□□□□□ -0.24
DDX56-204ENST00000431640 SIGLEC16A6NMB1 481 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 EIF3HO15372 352 aaKnown RBP eCLIP13.55□□□□□ -0.243e-6■□□□□ 11.2
DDX56-204ENST00000431640 TJP3O95049 919 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 VTNP04004 478 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 ITGB3P05106 788 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 NFICP08651 508 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 SMIM10L2AP0DMW4 78 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 SMIM10L2BP0DMW5 78 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 RALAP11233 206 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 CD19P15391 556 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 HOXC8P31273 242 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 PTPN7P35236 360 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 KCNJ1P48048 391 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 RAD23BP54727 409 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 GSCP56915 257 aaPredicted RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 TAS2R40P59535 323 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 GNGT1P63211 74 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 ADAM17P78536 824 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 ZNF200P98182 395 aaPredicted RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 KRT17Q04695 432 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 ZNF268Q14587 947 aaPredicted RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 TMEM132DQ14C87 1099 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 PPP1R15BQ5SWA1 713 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 SCARA3Q6AZY7 606 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 TRMT10CQ7L0Y3 403 aaKnown RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 TMEM192Q8IY95 271 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 TFAP2BQ92481 460 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 ARMC5Q96C12 935 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 SNF8Q96H20 258 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 TMEM176AQ96HP8 235 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 TMEM109Q9BVC6 243 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 DERAQ9Y315 318 aa13.55□□□□□ -0.24
DDX56-204ENST00000431640 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
DDX56-204ENST00000431640 NDC80O14777 642 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms