RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MTIF3Q9H2K0 278 aaKnown RBP19.37■□□□□ 0.69
HMGN1-206ENST00000431390 RAPGEFL1Q9UHV5 662 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 TSC2P49815 1807 aa19.37■□□□□ 0.69
HMGN1-206ENST00000431390 A0A0A6YYK5 440 aaPredicted RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 A8MXQ7 604 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 TMCO5BA8MYB1 307 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 GABRDO14764 452 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 B4GALT3O60512 393 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 FTLP02792 175 aaPredicted RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 IGFBP6P24592 240 aaPredicted RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 GNL1P36915 607 aaPredicted RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 NOMO3P69849 1222 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 TIGD5Q53EQ6 642 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 SGO2Q562F6 1265 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 CTNNBL1Q8WYA6 563 aaPredicted RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 SECISBP2LQ93073 1101 aaKnown RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 CYFIP2Q96F07 1278 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 HEXIM2Q96MH2 286 aaKnown RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 LHX5Q9H2C1 402 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 SLC28A3Q9HAS3 691 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 NME7Q9Y5B8 376 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 M0QZQ0 153 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 AMHP03971 560 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 CYP11A1P05108 521 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 ODC1P11926 461 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 CDH5P33151 784 aaPredicted RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 LHX1P48742 406 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 MRPS5P82675 430 aaKnown RBP19.36■□□□□ 0.69
HMGN1-206ENST00000431390 ORC1Q13415 861 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 CNGA2Q16280 664 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 WSCD1Q658N2 575 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 CRYBG2Q8N1P7 616 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 LRRC43Q8N309 656 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 TMEM35BQ8NCS4 154 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 RABGGTAQ92696 567 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 TOP1MTQ969P6 601 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 TNIP3Q96KP6 325 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 SUSD3Q96L08 255 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 TMEM175Q9BSA9 504 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 NRDE2Q9H7Z3 1164 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 DSEQ9UL01 958 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 CEP83Q9Y592 693 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 DUSP10Q9Y6W6 482 aa19.36■□□□□ 0.69
HMGN1-206ENST00000431390 NCANO14594 1321 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 TBKBP1A7MCY6 615 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 O00370 1275 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 KIF4AO95239 1232 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 CFHP08603 1231 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 NSFP46459 744 aaKnown RBP19.35■□□□□ 0.69
HMGN1-206ENST00000431390 GATMP50440 423 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 RABGGTBP53611 331 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 NAA35Q5VZE5 725 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 OSTM1Q86WC4 334 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 TRIM11Q96F44 468 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMGN1-206ENST00000431390 CHD7Q9P2D1 2997 aa19.35■□□□□ 0.69
HMGN1-206ENST00000431390 DGKIO75912 1065 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 OR1G1P47890 313 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 GNG11P61952 73 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 WDR5P61964 334 aaKnown RBP19.34■□□□□ 0.69
HMGN1-206ENST00000431390 DNTTIP2Q5QJE6 756 aaKnown RBP19.34■□□□□ 0.69
HMGN1-206ENST00000431390 LCLAT1Q6UWP7 414 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 ACOT1Q86TX2 421 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 DNAAF5Q86Y56 855 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 PHF13Q86YI8 300 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-206ENST00000431390 PASD1Q8IV76 773 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 VCPIP1Q96JH7 1222 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 UHRF1Q96T88 793 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-206ENST00000431390 IRX2Q9BZI1 471 aaPredicted RBP19.34■□□□□ 0.69
HMGN1-206ENST00000431390 THAP2Q9H0W7 228 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 DNAJB4Q9UDY4 337 aa19.34■□□□□ 0.69
HMGN1-206ENST00000431390 REV3LO60673 3130 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 MACROD2A1Z1Q3 448 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 MYBL1P10243 752 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 TYMPP19971 482 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 ABCB4P21439 1286 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 LMO2P25791 158 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 BRCC3P46736 316 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 GPC5P78333 572 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 TCEAL1Q15170 157 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 IFI16Q16666 785 aaKnown RBP19.33■□□□□ 0.69
HMGN1-206ENST00000431390 PAN2Q504Q3 1202 aaKnown RBP19.33■□□□□ 0.69
HMGN1-206ENST00000431390 ZNF569Q5MCW4 686 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 ARHGAP17Q68EM7 881 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 METTL23Q86XA0 190 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 CPA5Q8WXQ8 436 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 RFFLQ8WZ73 363 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 CALR3Q96L12 384 aaKnown RBP19.33■□□□□ 0.69
HMGN1-206ENST00000431390 NOX5Q96PH1 765 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 SALL4Q9UJQ4 1053 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 GTF3C4Q9UKN8 822 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 PCDHB8Q9UN66 801 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 COL4A6Q14031 1691 aa19.33■□□□□ 0.69
HMGN1-206ENST00000431390 TRAPPC3O43617 180 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 MICAL2O94851 1124 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 UPP2O95045 317 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 ALDH2P05091 517 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 ITGB1P05556 798 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 MYOGP15173 224 aa19.32■□□□□ 0.68
HMGN1-206ENST00000431390 PPP2R2DQ66LE6 453 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms