RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 C11orf54Q9H0W9 315 aaPredicted RBP4.78□□□□□ -1.64
HMGB3-203ENST00000430118 ADAM7Q9H2U9 754 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 NECTIN3Q9NQS3 549 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 PCMTD2Q9NV79 361 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 C9orf78Q9NZ63 289 aaPredicted RBP4.78□□□□□ -1.64
HMGB3-203ENST00000430118 FAM30AQ9NZY2 134 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 RNF181Q9P0P0 153 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 CFAP97Q9P2B7 532 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 PDP2Q9P2J9 529 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 CROTQ9UKG9 612 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 PCDHA6Q9UN73 950 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 PCDHA1Q9Y5I3 950 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 PALLDQ8WX93 1383 aa4.78□□□□□ -1.64
HMGB3-203ENST00000430118 C4BP0C0L5 1744 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 TTC21BQ7Z4L5 1316 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 EVC2Q86UK5 1308 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PMS2P1A4D2B8 440 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 TBC1D4O60343 1298 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 MATN4O95460 622 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ABHD16AO95870 558 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 CD1AP06126 327 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 DHRS4L1P0CG22 281 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 VSIG10L2P0DP72 767 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 HARSP12081 509 aaKnown RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 VEGFAP15692 232 aaPredicted RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ALOX15P16050 662 aaPredicted RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ZNF28P17035 718 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ITGB5P18084 799 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 KLRC1P26715 233 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PCSK1P29120 753 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PDIA3P30101 505 aaKnown RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 MC3RP41968 323 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 STAT5BP51692 787 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 KCNQ1P51787 676 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 CDR1P51861 262 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PTH1RQ03431 593 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 SLC13A2Q13183 592 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ZMAT1Q5H9K5 638 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 FAM47AQ5JRC9 791 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 JAKMIP3Q5VZ66 844 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 LMBRD2Q68DH5 695 aaPredicted RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 TRMT10BQ6PF06 316 aaKnown RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 USP17L6PQ6QN14 398 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 CYP26C1Q6V0L0 522 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 SEM1Q6ZVN7 128 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 KRT73Q86Y46 540 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 COLGALT2Q8IYK4 626 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 NAXEQ8NCW5 288 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 NLGN4YQ8NFZ3 816 aaPredicted RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 MZB1Q8WU39 189 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ZCCHC14Q8WYQ9 949 aaKnown RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 MPP4Q96JB8 637 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ZSWIM3Q96MP5 696 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PPP1R16BQ96T49 567 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 CDC5LQ99459 802 aaKnown RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PAGR1Q9BTK6 254 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 CARD11Q9BXL7 1154 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 OR10A2Q9H208 303 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 SLC6A15Q9H2J7 730 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 CNTD2Q9H8S5 307 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 SMURF2Q9HAU4 748 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 SAGE1Q9NXZ1 904 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 MBD1Q9UIS9 605 aaPredicted RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 MAGEL2Q9UJ55 1249 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PCDHGB3Q9Y5G1 929 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 RGPD5Q99666 1765 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 NSD2O96028 1365 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 ATRNL1Q5VV63 1379 aa4.77□□□□□ -1.65
HMGB3-203ENST00000430118 KTN1Q86UP2 1357 aaKnown RBP4.77□□□□□ -1.65
HMGB3-203ENST00000430118 PCDH11XQ9BZA7 1347 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 PCDH11YQ9BZA8 1340 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 LTN1O94822 1766 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 M0R3H8 397 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 BTN3A1O00481 513 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 PJA2O43164 708 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 IRAK2O43187 625 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 INMTO95050 263 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 MT-ND5P03915 603 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 HSP90AA1P07900 732 aaKnown RBP4.76□□□□□ -1.65
HMGB3-203ENST00000430118 SRGNP10124 158 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 POLE2P56282 527 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 RPS16P62249 146 aaKnown RBP4.76□□□□□ -1.65
HMGB3-203ENST00000430118 FOXO4P98177 505 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 CREMQ03060 361 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 PRKG1Q13976 671 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 EFR3AQ14156 821 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 INTS11Q5TA45 600 aaKnown RBP4.76□□□□□ -1.65
HMGB3-203ENST00000430118 ARL6IP4Q66PJ3 421 aaKnown RBP4.76□□□□□ -1.65
HMGB3-203ENST00000430118 TANGO2Q6ICL3 276 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 MZT2AQ6P582 158 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 LVRNQ6Q4G3 990 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 ZNF605Q86T29 641 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 MICU3Q86XE3 530 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 TXLNBQ8N3L3 684 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 AOPEPQ8N6M6 819 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 DCBLD1Q8N8Z6 715 aa4.76□□□□□ -1.65
HMGB3-203ENST00000430118 GIMAP8Q8ND71 665 aaPredicted RBP4.76□□□□□ -1.65
HMGB3-203ENST00000430118 PPHLN1Q8NEY8 458 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms