RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 LSM8O95777 96 aaKnown RBP9.19□□□□□ -0.94
GABPB1-205ENST00000429662 CCNE2O96020 404 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 C4BPAP04003 597 aaKnown RBP9.19□□□□□ -0.94
GABPB1-205ENST00000429662 CALB1P05937 261 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 MYCLP12524 364 aaPredicted RBP9.19□□□□□ -0.94
GABPB1-205ENST00000429662 NQO1P15559 274 aaKnown RBP9.19□□□□□ -0.94
GABPB1-205ENST00000429662 EIF2AK2P19525 551 aaKnown RBP9.19□□□□□ -0.94
GABPB1-205ENST00000429662 RRM1P23921 792 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 FLT3LGP49771 235 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 LIG4P49917 911 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 BNIP1Q12981 228 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 SPP2Q13103 211 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 IRF5Q13568 498 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 CUL2Q13617 745 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 LONRF1Q17RB8 773 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 XKR3Q5GH77 459 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 SPDYAQ5MJ70 313 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 IZUMO3Q5VZ72 239 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 NUGGCQ68CJ6 796 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 MIS18BP1Q6P0N0 1132 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 VSTM1Q6UX27 236 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 NSMFQ6X4W1 530 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 RGS9BPQ6ZS82 235 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 ANKS1BQ7Z6G8 1248 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 CPXCR1Q8N123 301 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 FEZF2Q8TBJ5 459 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
GABPB1-205ENST00000429662 ZNF518BQ9C0D4 1074 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 NOD2Q9HC29 1040 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 RAVER2Q9HCJ3 691 aaKnown RBP9.19□□□□□ -0.94
GABPB1-205ENST00000429662 CD248Q9HCU0 757 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 CHST7Q9NS84 486 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 ADAM22Q9P0K1 906 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 GABBR1Q9UBS5 961 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 PRKAG3Q9UGI9 489 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 FETUBQ9UGM5 382 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 PPME1Q9Y570 386 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 LOC285556D6RIA3 1793 aa9.19□□□□□ -0.94
GABPB1-205ENST00000429662 MYH11P35749 1972 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 GSTTP1A0A1W2PQM5 241 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 FAM47DPA6NHR8 397 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 PDHXO00330 501 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 DNALI1O14645 258 aaPredicted RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 TP73O15350 636 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 PRPF4O43172 522 aaKnown RBP eCLIP9.18□□□□□ -0.944e-7■■□□□ 12.4
GABPB1-205ENST00000429662 ATP2C2O75185 946 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 WFS1O76024 890 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 STBD1O95210 358 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 HLA-DRAP01903 254 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 RALAP11233 206 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 ALADP13716 330 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 TSHRP16473 764 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 TNNI1P19237 187 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 CCND1P24385 295 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 KLRC2P26717 231 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 CHKAP35790 457 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 PIK3CAP42336 1068 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 MAGEA4P43358 317 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 NAMPTP43490 491 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 IFNAR2P48551 515 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 SNAPC2Q13487 334 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 MAMLD1Q13495 774 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 SNX1Q13596 522 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 MORF4L2Q15014 288 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 SETDB1Q15047 1291 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 SURF1Q15526 300 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 KYNUQ16719 465 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 GNPTABQ3T906 1256 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 ZC3H12AQ5D1E8 599 aaKnown RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 PLA2G4FQ68DD2 849 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 SLC39A4Q6P5W5 647 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 GSTA5Q7RTV2 222 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 ANKLE1Q8NAG6 615 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 ZSWIM2Q8NEG5 633 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 UHMK1Q8TAS1 419 aaKnown RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 NSUN6Q8TEA1 469 aaKnown RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 MYLIPQ8WY64 445 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 FAM122AQ96E09 287 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 POP1Q99575 1024 aaKnown RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 CGRRF1Q99675 332 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 FAM213AQ9BRX8 229 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 DDX23Q9BUQ8 820 aaKnown RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.18□□□□□ -0.941e-6■■■□□ 14.7
GABPB1-205ENST00000429662 TMEM134Q9H6X4 195 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 AS3MTQ9HBK9 375 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 SSU72Q9NP77 194 aaKnown RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 CYP26B1Q9NR63 512 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 TXLNGQ9NUQ3 528 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 SLC24A2Q9UI40 661 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 AGO2Q9UKV8 859 aaKnown RBP9.18□□□□□ -0.94
GABPB1-205ENST00000429662 NAALADL1Q9UQQ1 740 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 STARD13Q9Y3M8 1113 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 PCDHB4Q9Y5E5 795 aa9.18□□□□□ -0.94
GABPB1-205ENST00000429662 CFAP54Q96N23 3096 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 UMODL1Q5DID0 1318 aa9.17□□□□□ -0.94
GABPB1-205ENST00000429662 TLR3O15455 904 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 HNRNPCL1O60812 293 aaKnown RBP9.17□□□□□ -0.94
GABPB1-205ENST00000429662 ATP9AO75110 1047 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms