RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MYBPC1Q00872 1141 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PDE4DQ08499 809 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CD300CQ08708 224 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 NIPAL4Q0D2K0 466 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PSMD6Q15008 389 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 EFTUD2Q15029 972 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PCSK7Q16549 785 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 MOGQ16653 247 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PLEKHG4Q58EX7 1191 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 ANKRD40Q6AI12 368 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 HACE1Q8IYU2 909 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC38A6Q8IZM9 456 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 MINDY2Q8NBR6 621 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 MORC4Q8TE76 937 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 JADE3Q92613 823 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 GLG1Q92896 1179 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CFAP57Q96MR6 1250 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CDC42EP4Q9H3Q1 356 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 GREM2Q9H772 168 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CAAP1Q9H8G2 361 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 MARCH7Q9H992 704 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 OLFML3Q9NRN5 406 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 MRGBPQ9NV56 204 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 HEY2Q9UBP5 337 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 SLC7A8Q9UHI5 535 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 VPS51Q9UID3 782 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 PLA2G4CQ9UP65 541 aa9.29□□□□□ -0.92
CDC42BPA-206ENST00000429440 CLOCKO15516 846 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 TRPA1O75762 1119 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 FGAP02671 866 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 C6orf222P0C671 652 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 FAM58BPP0C7Q3 252 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 JAK1P23458 1154 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ADAM17P78536 824 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 CDK18Q07002 472 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ACAP1Q15027 740 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 KIF6Q6ZMV9 814 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 NT5DC3Q86UY8 548 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 CLVS1Q8IUQ0 354 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 SRRM1Q8IYB3 904 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 NATD1Q8N6N6 113 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 TRUB1Q8WWH5 349 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 PACSIN1Q9BY11 444 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 CDH19Q9H159 772 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 KANSL3Q9P2N6 904 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ADAMTS6Q9UKP5 1117 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 PCDHA4Q9UN74 947 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 SMG5Q9UPR3 1016 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ANGPTL3Q9Y5C1 460 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 HEMK1Q9Y5R4 338 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZMYM2Q9UBW7 1377 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ARAP2Q8WZ64 1704 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZNF213O14771 459 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 GNPATO15228 680 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 IDH1O75874 414 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 KLHL2O95198 593 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 STAMBPO95630 424 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 TTC4O95801 387 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 CYP1A2P05177 515 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 PEX2P28328 305 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZAP70P43403 619 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 IST1P53990 364 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 DLG4P78352 724 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 CDK16Q00536 496 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 IFITM2Q01629 132 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 FKBP4Q02790 459 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 BTKQ06187 659 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ATP1A4Q13733 1029 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 DPYSQ14117 519 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 PTK2BQ14289 1009 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 TNIP1Q15025 636 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 INSCQ1MX18 579 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 OGFRL1Q5TC84 451 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 LPCAT4Q643R3 524 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 OGFOD2Q6N063 350 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 MICU3Q86XE3 530 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 TAMM41Q96BW9 452 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 RIOK1Q9BRS2 568 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 PUS7LQ9H0K6 701 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 C1orf21Q9H246 121 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 TMOD2Q9NZR1 351 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 HACD3Q9P035 362 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 EPS15L1Q9UBC2 864 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 NAALADL1Q9UQQ1 740 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 APOBEC2Q9Y235 224 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 NR2E1Q9Y466 385 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 PCDHGA3Q9Y5H0 932 aa9.28□□□□□ -0.92
CDC42BPA-206ENST00000429440 ROBO1Q9Y6N7 1651 aa9.27□□□□□ -0.92
CDC42BPA-206ENST00000429440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 B2RBV5 119 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 E9PMD0 336 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 SCO2O43819 266 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 TSPAN9O75954 239 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 STARD3NLO95772 234 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 ALAS1P13196 640 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 ANXA13P27216 316 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 MCAMP43121 646 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 HAND2P61296 217 aa9.27□□□□□ -0.93
CDC42BPA-206ENST00000429440 B2MP61769 119 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms