RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 APBB2Q92870 758 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 TMEM176AQ96HP8 235 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 PSMB7Q99436 277 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 CRISPLD1Q9H336 500 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 RC3H2Q9HBD1 1191 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 ST7Q9NRC1 585 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 NAGPAQ9UK23 515 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 PACSIN2Q9UNF0 486 aaPredicted RBP10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 STXBP5LQ9Y2K9 1186 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 FAN1Q9Y2M0 1017 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 PLXNA4Q9HCM2 1894 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 TLL1O43897 1013 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 AMHP03971 560 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 CA3P07451 260 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 LINC00271P0C7V0 271 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 DNAJB1P25685 340 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ALDH7A1P49419 539 aaKnown RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 PDE6CP51160 858 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 NAA30Q147X3 362 aaPredicted RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 KYAT1Q16773 422 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 KCNT2Q6UVM3 1135 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ZNF689Q96CS4 500 aaPredicted RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 LBHD1Q9BQE6 289 aaPredicted RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 C11orf70Q9BRQ4 267 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 L2HGDHQ9H9P8 463 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 SLC4A7Q9Y6M7 1214 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 TSC2P49815 1807 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 BPTFQ12830 3046 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ABHD14A-ACY1A0A1B0GW23 586 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ARHGAP6O43182 974 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 FTLP02792 175 aaPredicted RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ALDH2P05091 517 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 TNFAIP3P21580 790 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 PGFP49763 221 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 NDUFV1P49821 464 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ZNF132P52740 706 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 AP3M2P53677 418 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ALKBH5Q6P6C2 394 aaKnown RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 MMS22LQ6ZRQ5 1243 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 PAQR9Q6ZVX9 377 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 GPRIN1Q7Z2K8 1008 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 LRRC52Q8N7C0 313 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ATAD1Q8NBU5 361 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ST13P5Q8NFI4 369 aaPredicted RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 ZNF518BQ9C0D4 1074 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 SLC38A7Q9NVC3 462 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 FBXL5Q9UKA1 691 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 TSPAN16Q9UKR8 245 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 BARX2Q9UMQ3 279 aaPredicted RBP10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 DERAQ9Y315 318 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 PCDHA13Q9Y5I0 950 aa10.12□□□□□ -0.79
HMGCLL1-206ENST00000428842 SPEGQ15772 3267 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 M0QYV0 167 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 ENC1O14682 589 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 NRDCO43847 1150 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 PFKMP08237 780 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 CYP2F1P24903 491 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 ARHGAP25P42331 645 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 GALCP54803 685 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 RNASE9P60153 205 aaKnown RBP10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 CBX1P83916 185 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 SLC18A3Q16572 532 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 GOLGA7BQ2TAP0 167 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 SV2CQ496J9 727 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 SLC39A12Q504Y0 691 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 PMF1Q6P1K2 205 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 TMTC1Q8IUR5 882 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 HERC6Q8IVU3 1022 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 PIAS4Q8N2W9 510 aaPredicted RBP10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 PCED1BQ96HM7 432 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 RNPC3Q96LT9 517 aaKnown RBP10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 WDR24Q96S15 920 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 CPXM1Q96SM3 734 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 SNX25Q9H3E2 840 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 COG5Q9UP83 839 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 YBX2Q9Y2T7 364 aaKnown RBP10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 CAPN6Q9Y6Q1 641 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 MICAL2O94851 1124 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 MOCS3O95396 460 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 FERP16591 822 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 FECHP22830 423 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 BDNFP23560 247 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 TBXAS1P24557 533 aaPredicted RBP10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 CDR2Q01850 454 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 PPIGQ13427 754 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 OVOS1Q6IE37 1185 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 FUT10Q6P4F1 479 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 SCUBE3Q8IX30 993 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 FUKQ8N0W3 1084 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 KLHL23Q8NBE8 558 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 B3GALNT2Q8NCR0 500 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 HTATIP2Q9BUP3 242 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 NT5C1AQ9BXI3 368 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 SEZ6LQ9BYH1 1024 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 MIS12Q9H081 205 aa10.11□□□□□ -0.79
HMGCLL1-206ENST00000428842 GOLGA8SH3BPF8 625 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms