RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TTC9BQ8N6N2 239 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 HDAC7Q8WUI4 952 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 SMG7Q92540 1137 aaKnown RBP15.53■□□□□ 0.08
SGCE-204ENST00000428696 UBE2TQ9NPD8 197 aaPredicted RBP15.53■□□□□ 0.08
SGCE-204ENST00000428696 CISHQ9NSE2 258 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 VWA8A3KMH1 1905 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 XIRP2A4UGR9 3374 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 MTMR11A4FU01 709 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 XYLBO75191 536 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 FAM163BP0C2L3 166 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 ATP1A3P13637 1013 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 COPB1P53618 953 aaKnown RBP15.52■□□□□ 0.08
SGCE-204ENST00000428696 TWF1Q12792 350 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 COL19A1Q14993 1142 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 MAPRE1Q15691 268 aaKnown RBP15.52■□□□□ 0.08
SGCE-204ENST00000428696 TAF12Q16514 161 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 UVSSAQ2YD98 709 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 LEXMQ3ZCV2 418 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 MIIPQ5JXC2 388 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 GJB7Q6PEY0 223 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 LIMS2Q7Z4I7 341 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 ARHGEF19Q8IW93 802 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 ELMOD1Q8N336 334 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 B3GALNT2Q8NCR0 500 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 RNF214Q8ND24 703 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.52■□□□□ 0.08
SGCE-204ENST00000428696 FEZF2Q8TBJ5 459 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 SPATA18Q8TC71 538 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 GPR152Q8TDT2 470 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 MSLNLQ96KJ4 702 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 TNIP3Q96KP6 325 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 HEXIM2Q96MH2 286 aaKnown RBP15.52■□□□□ 0.08
SGCE-204ENST00000428696 ADAM7Q9H2U9 754 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 CRTAC1Q9NQ79 661 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 HMGXB4Q9UGU5 601 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 USP15Q9Y4E8 981 aaPredicted RBP15.52■□□□□ 0.08
SGCE-204ENST00000428696 PCDHB4Q9Y5E5 795 aa15.52■□□□□ 0.08
SGCE-204ENST00000428696 PMM2O15305 246 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 SERPINC1P01008 464 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 SP100P23497 879 aaPredicted RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 TBXAS1P24557 533 aaPredicted RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 CYP2F1P24903 491 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 USP8P40818 1118 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 TUFMP49411 452 aaKnown RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 EPHB3P54753 998 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 YWHAEP62258 255 aaKnown RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 APBA1Q02410 837 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 ITIH3Q06033 890 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 IQCB1Q15051 598 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 ARHGAP44Q17R89 818 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 LRSAM1Q6UWE0 723 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 C4orf50Q6ZRC1 276 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 GRASPQ7Z6J2 395 aaPredicted RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.51■□□□□ 0.07
SGCE-204ENST00000428696 TCEAL8Q8IYN2 117 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 GIPC2Q8TF65 315 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 ATXN2LQ8WWM7 1075 aaKnown RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 KAT5Q92993 513 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 MYLPFQ96A32 169 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 ZNF512Q96ME7 567 aaPredicted RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 RIPOR3Q96MK2 946 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 NT5C1AQ9BXI3 368 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 BCO2Q9BYV7 579 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 RHOBTB2Q9BYZ6 727 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 PRKD2Q9BZL6 878 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 S1PR5Q9H228 398 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 CRISPLD1Q9H336 500 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 FAM49BQ9NUQ9 324 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 ZDHHC7Q9NXF8 308 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 FAM50BQ9Y247 325 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 NME7Q9Y5B8 376 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 INSL5Q9Y5Q6 135 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 GRXCR2A6NFK2 248 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 CLDN5O00501 218 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 CAVIN2O95810 425 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 C1RP00736 705 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 KRT5P13647 590 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 BDNFP23560 247 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 PON1P27169 355 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 GRIK1P39086 918 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 UBXN1Q04323 297 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 SMARCB1Q12824 385 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 SMAD4Q13485 552 aaKnown RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 DDR2Q16832 855 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 SDHAF4Q5VUM1 108 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 IQCEQ6IPM2 695 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 PHLDB3Q6NSJ2 640 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 C12orf29Q8N999 325 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 SMRP1Q8NCR6 262 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 LMO3Q8TAP4 145 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 MYCBPAPQ8TBZ2 947 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 SPPL2BQ8TCT7 592 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 ASB2Q96Q27 587 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 CORO1BQ9BR76 489 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 LSM14BQ9BX40 385 aaKnown RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 LIMA1Q9UHB6 759 aaKnown RBP15.51■□□□□ 0.07
SGCE-204ENST00000428696 YIPF1Q9Y548 306 aa15.51■□□□□ 0.07
SGCE-204ENST00000428696 ATG2AQ2TAZ0 1938 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 MBTPS2O43462 519 aa15.5■□□□□ 0.07
SGCE-204ENST00000428696 VNN2O95498 520 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms