RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CSGALNACT2Q8N6G5 542 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 BPIFB1Q8TDL5 484 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 CSGALNACT1Q8TDX6 532 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
SEC13-210ENST00000428626 TRIM9Q9C026 710 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 DDX43Q9NXZ2 648 aaKnown RBP16.7■□□□□ 0.26
SEC13-210ENST00000428626 OBP2AQ9NY56 170 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 SMG5Q9UPR3 1016 aaKnown RBP16.7■□□□□ 0.26
SEC13-210ENST00000428626 PCDHB5Q9Y5E4 795 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 NCOR2Q9Y618 2525 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 SPTBN2O15020 2390 aa16.7■□□□□ 0.26
SEC13-210ENST00000428626 OTOL1A6NHN0 477 aaPredicted RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 DPYSL4O14531 572 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 PRPF40AO75400 957 aaKnown RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 LDHAP00338 332 aaKnown RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 TGM1P22735 817 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 CYP2F1P24903 491 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 CDC25CP30307 473 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 KPNA1P52294 538 aaPredicted RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 DDR2Q16832 855 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 SOWAHAQ2M3V2 549 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 ARHGAP29Q52LW3 1261 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 INTS6LQ5JSJ4 861 aaKnown RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 FOXD4L5Q5VV16 416 aaPredicted RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 TXNDC8Q6A555 127 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 CMTM8Q8IZV2 173 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 GPD1LQ8N335 351 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 LRRC52Q8N7C0 313 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 LEO1Q8WVC0 666 aaPredicted RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 FOXD4L4Q8WXT5 416 aaPredicted RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 USP13Q92995 863 aaPredicted RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 ACBD6Q9BR61 282 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 C8orf33Q9H7E9 229 aaPredicted RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 GDAP2Q9NXN4 497 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 GTF3C4Q9UKN8 822 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 ITGA11Q9UKX5 1188 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
SEC13-210ENST00000428626 ZNF638Q14966 1978 aaKnown RBP16.69■□□□□ 0.26
SEC13-210ENST00000428626 ATG2BQ96BY7 2078 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 GABRDO14764 452 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 ATP2C2O75185 946 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 KRT19P08727 400 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 CASP1P29466 404 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 TSPY1Q01534 308 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 PON2Q15165 354 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 TRIM68Q6AZZ1 485 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
SEC13-210ENST00000428626 LIMS2Q7Z4I7 341 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 CCDC65Q8IXS2 484 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 CACTINQ8WUQ7 758 aaKnown RBP16.68■□□□□ 0.26
SEC13-210ENST00000428626 FAM83CQ9BQN1 747 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 TMEM206Q9H813 350 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 HPS4Q9NQG7 708 aa16.68■□□□□ 0.26
SEC13-210ENST00000428626 GREB1Q4ZG55 1949 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 ANAPC1Q9H1A4 1944 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 K7ESF4 209 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 TGFB1I1O43294 461 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 HUS1O60921 280 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 PPP6R2O75170 966 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 LMO2P25791 158 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 CXCL12P48061 93 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 RBP5P82980 135 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 EHHADHQ08426 723 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 SRSF5Q13243 272 aaKnown RBP16.67■□□□□ 0.26
SEC13-210ENST00000428626 CCINQ13939 588 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 TAF12Q16514 161 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 LPAL2Q16609 132 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 PKN3Q6P5Z2 889 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 ERMP1Q7Z2K6 904 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 RALGPS2Q86X27 583 aaPredicted RBP16.67■□□□□ 0.26
SEC13-210ENST00000428626 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 TMEM86AQ8N2M4 240 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 SPEM1Q8N4L4 309 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 TOP6BLQ8N6T0 577 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 CELF5Q8N6W0 485 aaKnown RBP16.67■□□□□ 0.26
SEC13-210ENST00000428626 KBTBD7Q8WVZ9 684 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 DHX58Q96C10 678 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 GCNAQ96QF7 691 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 SLC22A12Q96S37 553 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 IER2Q9BTL4 223 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 FAM126AQ9BYI3 521 aaPredicted RBP16.67■□□□□ 0.26
SEC13-210ENST00000428626 PARD6AQ9NPB6 346 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 GKN1Q9NS71 199 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 HSPBP1Q9NZL4 362 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 NCDNQ9UBB6 729 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 MAGED2Q9UNF1 606 aaPredicted RBP16.67■□□□□ 0.26
SEC13-210ENST00000428626 NME7Q9Y5B8 376 aa16.67■□□□□ 0.26
SEC13-210ENST00000428626 SDK1Q7Z5N4 2213 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 NOL4O94818 638 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 TMEM191BP0C7N4 346 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 CCR3P51677 355 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 FOXK2Q01167 660 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 NFE2Q16621 373 aaPredicted RBP16.66■□□□□ 0.26
SEC13-210ENST00000428626 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
SEC13-210ENST00000428626 NAIF1Q69YI7 327 aaPredicted RBP16.66■□□□□ 0.26
SEC13-210ENST00000428626 FAM171BQ6P995 826 aa16.66■□□□□ 0.26
SEC13-210ENST00000428626 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms