RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 SF3A2Q15428 464 aaKnown RBP17.84■□□□□ 0.45
VARS-216ENST00000428445 CSRP2Q16527 193 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 DDR2Q16832 855 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 PPM1JQ5JR12 505 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 SLFN12LQ6IEE8 588 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 C1orf228Q6PIY5 440 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 WDR5BQ86VZ2 330 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 KRI1Q8N9T8 703 aaKnown RBP17.84■□□□□ 0.45
VARS-216ENST00000428445 SPPL2BQ8TCT7 592 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 CLIC6Q96NY7 704 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 FAM213AQ9BRX8 229 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 ARRDC1-AS1Q9H2J1 176 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 SMOC1Q9H4F8 434 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 RXFP3Q9NSD7 469 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 THG1LQ9NWX6 298 aaKnown RBP17.84■□□□□ 0.45
VARS-216ENST00000428445 AGAP1Q9UPQ3 857 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 CACNA1BQ00975 2339 aa17.83■□□□□ 0.45
VARS-216ENST00000428445 CYP2F1P24903 491 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 POLR2BP30876 1174 aaKnown RBP17.83■□□□□ 0.44
VARS-216ENST00000428445 CNR2P34972 360 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 TFAMQ00059 246 aaKnown RBP17.83■□□□□ 0.44
VARS-216ENST00000428445 PLCB2Q00722 1185 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 FAM173BQ6P4H8 233 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 KBTBD6Q86V97 674 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 OSTM1Q86WC4 334 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 PDCL2Q8N4E4 241 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 NETO1Q8TDF5 533 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 CYP2S1Q96SQ9 504 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 STRA6Q9BX79 667 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 FGFBP2Q9BYJ0 223 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 CCSER1Q9C0I3 900 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 ST6GALNAC4Q9H4F1 302 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 PCDHB5Q9Y5E4 795 aa17.83■□□□□ 0.44
VARS-216ENST00000428445 SPAG17Q6Q759 2223 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 PPP1R37O75864 691 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 BMP15O95972 392 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 ITGB3P05106 788 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 AVPR1AP37288 418 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 GALK1P51570 392 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 CASP5P51878 434 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 SV2CQ496J9 727 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 TMEM196Q5HYL7 178 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 DCP1BQ8IZD4 617 aaKnown RBP17.82■□□□□ 0.44
VARS-216ENST00000428445 C1orf127Q8N9H9 656 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 NOC3LQ8WTT2 800 aaKnown RBP17.82■□□□□ 0.44
VARS-216ENST00000428445 C2orf15Q8WU43 125 aaKnown RBP17.82■□□□□ 0.44
VARS-216ENST00000428445 SLC22A12Q96S37 553 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 PANK2Q9BZ23 570 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 PCIF1Q9H4Z3 704 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 MRPL44Q9H9J2 332 aaKnown RBP17.82■□□□□ 0.44
VARS-216ENST00000428445 TDP1Q9NUW8 608 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 DDX43Q9NXZ2 648 aaKnown RBP17.82■□□□□ 0.44
VARS-216ENST00000428445 GTF3C4Q9UKN8 822 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 L1RE1Q9UN81 338 aa17.82■□□□□ 0.44
VARS-216ENST00000428445 ANTXRLA6NF34 631 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 LRP3O75074 770 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 RNF40O75150 1001 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 TADA3O75528 432 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 ADRB1P08588 477 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 CEBPZQ03701 1054 aaKnown RBP17.81■□□□□ 0.44
VARS-216ENST00000428445 BFSP1Q12934 665 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 PTPAQ15257 358 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 LMBRD2Q68DH5 695 aaPredicted RBP17.81■□□□□ 0.44
VARS-216ENST00000428445 DNAJC19Q96DA6 116 aa17.81■□□□□ 0.44
VARS-216ENST00000428445 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.81■□□□□ 0.44
VARS-216ENST00000428445 GREB1Q4ZG55 1949 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 VPS37CA5D8V6 355 aaPredicted RBP17.8■□□□□ 0.44
VARS-216ENST00000428445 TRDMT1O14717 391 aaKnown RBP17.8■□□□□ 0.44
VARS-216ENST00000428445 IL18RAPO95256 599 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 GCNT3O95395 438 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 GRSF1Q12849 480 aaKnown RBP eCLIP17.8■□□□□ 0.44
VARS-216ENST00000428445 MON1AQ86VX9 555 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 SYNPOQ8N3V7 929 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 CSGALNACT2Q8N6G5 542 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 CXorf38Q8TB03 319 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 EZH1Q92800 747 aaPredicted RBP17.8■□□□□ 0.44
VARS-216ENST00000428445 HHIPQ96QV1 700 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 UPF2Q9HAU5 1272 aaKnown RBP17.8■□□□□ 0.44
VARS-216ENST00000428445 TRPC7Q9HCX4 862 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 FBXO2Q9UK22 296 aaPredicted RBP17.8■□□□□ 0.44
VARS-216ENST00000428445 ACACBO00763 2458 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 ANAPC1Q9H1A4 1944 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 EPG5Q9HCE0 2579 aa17.8■□□□□ 0.44
VARS-216ENST00000428445 DCLK1O15075 740 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 ATP2C2O75185 946 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 RPP40O75818 363 aaKnown RBP17.79■□□□□ 0.44
VARS-216ENST00000428445 KRT19P08727 400 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 HOXA6P31267 233 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 TSPY1Q01534 308 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 POU5F1Q01860 360 aaKnown RBP17.79■□□□□ 0.44
VARS-216ENST00000428445 SMARCB1Q12824 385 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 POSTNQ15063 836 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 AASDHQ4L235 1098 aaPredicted RBP17.79■□□□□ 0.44
VARS-216ENST00000428445 L1TD1Q5T7N2 865 aaKnown RBP17.79■□□□□ 0.44
VARS-216ENST00000428445 RRAGBQ5VZM2 374 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 BRAPQ7Z569 592 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 GAB3Q8WWW8 586 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 MRPS31Q92665 395 aaKnown RBP17.79■□□□□ 0.44
VARS-216ENST00000428445 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
VARS-216ENST00000428445 ACCSQ96QU6 501 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms