RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 CEP295NLQ96MC4 621 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 FNBP1Q96RU3 617 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 C7orf25Q9BPX7 421 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 HSPBP1Q9NZL4 362 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 L1RE1Q9UN81 338 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 FANCMQ8IYD8 2048 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 PATJQ8NI35 1801 aa16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 NUP210Q8TEM1 1887 aaPredicted RBP16.61■□□□□ 0.25
CTDSP1-202ENST00000428361 GVINP1Q7Z2Y8 2422 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 ARNTLO00327 626 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 F13A1P00488 732 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 AMPD2Q01433 879 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 CFAP221Q4G0U5 840 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 DGKKQ5KSL6 1271 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 LRRTM3Q86VH5 581 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 SPATA2LQ8IUW3 424 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 CEP57L1Q8IYX8 460 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 GPR161Q8N6U8 529 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 GOLGA5Q8TBA6 731 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 GIPC2Q8TF65 315 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 LMAN1LQ9HAT1 526 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 EHD2Q9NZN4 543 aa16.6■□□□□ 0.25
CTDSP1-202ENST00000428361 VPS13AQ96RL7 3174 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 TICRRQ7Z2Z1 1910 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 PVALEFA0A1B0GWK0 134 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 NRG2O14511 850 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 POLR2DO15514 142 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 CCNE1P24864 410 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 PDE6CP51160 858 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 MTAPQ13126 283 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 STXBP5Q5T5C0 1151 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 CMTM8Q8IZV2 173 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 SYNPOQ8N3V7 929 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 ZBTB44Q8NCP5 570 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 TRMT2BQ96GJ1 504 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 HPDLQ96IR7 371 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 PI4K2AQ9BTU6 479 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 MKNK1Q9BUB5 465 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 FGFBP2Q9BYJ0 223 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 IL21Q9HBE4 155 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 CDH9Q9ULB4 789 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 CFAP54Q96N23 3096 aa16.59■□□□□ 0.25
CTDSP1-202ENST00000428361 EP300Q09472 2414 aaPredicted RBP16.58■□□□□ 0.25
CTDSP1-202ENST00000428361 MYBPHLA2RUH7 354 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 GABRDO14764 452 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 FAM163BP0C2L3 166 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 TNNI1P19237 187 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 NLRP12P59046 1061 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 CYP4F8P98187 520 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 CC2D1AQ6P1N0 951 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 VSTM1Q6UX27 236 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 EPM2AIP1Q7L775 607 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 ZNF687Q8N1G0 1237 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 XXYLT1Q8NBI6 393 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 CXorf38Q8TB03 319 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 NELL1Q92832 810 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 AGPAT3Q9NRZ7 376 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 NCDNQ9UBB6 729 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 SIX4Q9UIU6 781 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 RAB23Q9ULC3 237 aa16.58■□□□□ 0.24
CTDSP1-202ENST00000428361 COL4A2P08572 1712 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 SLC38A8A6NNN8 435 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 SPECC1L-ADORA2AF8WAN1 911 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 NOL4O94818 638 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 CTHP32929 405 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 MAGEA11P43364 429 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 ID4P47928 161 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 CXCL12P48061 93 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 WNT7BP56706 349 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 FZD5Q13467 585 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 ZNF268Q14587 947 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 ITPRIPL2Q3MIP1 535 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 FOXD4L5Q5VV16 416 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 ERMP1Q7Z2K6 904 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 C12orf56Q8IXR9 622 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 SPEM1Q8N4L4 309 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 ZSWIM2Q8NEG5 633 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 FOXD4L4Q8WXT5 416 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 RSPRY1Q96DX4 576 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 MYRFLQ96LU7 910 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 EPC1Q9H2F5 836 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 TDP1Q9NUW8 608 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 USP25Q9UHP3 1055 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 GTF3C4Q9UKN8 822 aa16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 MAGED2Q9UNF1 606 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-202ENST00000428361 NCANO14594 1321 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 SHISA7A6NL88 538 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 LILRB5O75023 590 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 PRAMEF12O95522 483 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 F11P03951 625 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 MYL1P05976 194 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 DLATP10515 647 aaKnown RBP16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 CHRNB1P11230 501 aa16.56■□□□□ 0.24
CTDSP1-202ENST00000428361 HMGA1P17096 107 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms