RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GSTT2BP0CG30 244 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF12P17014 697 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 NUP107P57740 925 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 MYBPC1Q00872 1141 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ITGA7Q13683 1181 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ARHGAP44Q17R89 818 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF362Q5T0B9 420 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-206ENST00000428313 SPTY2D1Q68D10 685 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ADGRD1Q6QNK2 874 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 CASP10Q92851 521 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 DHRS4Q9BTZ2 278 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 STRIP2Q9ULQ0 834 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 PCDHA12Q9UN75 941 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 MYPNQ86TC9 1320 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 FAM237BA0A1B0GVD1 139 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 C2orf71A6NGG8 1288 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 H3BSA7 217 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ITM2AO43736 263 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ATP6V1B1P15313 513 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 PPARGP37231 505 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-206ENST00000428313 PHKA2P46019 1235 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 CCR3P51677 355 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ADCY7P51828 1080 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 PDIA2Q13087 525 aaKnown RBP16.85■□□□□ 0.29
C9orf3-206ENST00000428313 GRAMD1BQ3KR37 738 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF804AQ7Z570 1209 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 NANOGNBQ7Z5D8 188 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 PRPF39Q86UA1 669 aaKnown RBP16.85■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF384Q8TF68 577 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 SLC5A5Q92911 643 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 GCNAQ96QF7 691 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 PHF12Q96QT6 1004 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 RRN3Q9NYV6 651 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 COQ6Q9Y2Z9 468 aa16.85■□□□□ 0.29
C9orf3-206ENST00000428313 MYH14Q7Z406 1995 aaKnown RBP16.85■□□□□ 0.29
C9orf3-206ENST00000428313 POTEB3A0JP26 581 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 FUOMA2VDF0 154 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 ETV4P43268 484 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 BTKQ06187 659 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 TGFBIQ15582 683 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 PGM2L1Q6PCE3 622 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 SLC2A7Q6PXP3 512 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 POTEBQ6S5H4 581 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 TMEM126BQ8IUX1 230 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 ETNPPLQ8TBG4 499 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 DCUN1D1Q96GG9 259 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 BTBD6Q96KE9 485 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 HAUS8Q9BT25 410 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 TBC1D23Q9NUY8 699 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 C6orf203Q9P0P8 240 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-206ENST00000428313 INPP5FQ9Y2H2 1132 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 PPME1Q9Y570 386 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 SPATA31A5Q5VU36 1347 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 SPATA31A6Q5VVP1 1343 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 SPATA31A7Q8IWB4 1347 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 GOLGA8HP0CJ92 632 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 RAG1P15918 1043 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 S100A1P23297 94 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 ALDH1A3P47895 512 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
C9orf3-206ENST00000428313 ZNF200P98182 395 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-206ENST00000428313 KLF1Q13351 362 aaPredicted RBP16.84■□□□□ 0.29
C9orf3-206ENST00000428313 CHRNA2Q15822 529 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 TRIM50Q86XT4 487 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 CATSPER1Q8NEC5 780 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 C7orf26Q96N11 449 aa16.84■□□□□ 0.29
C9orf3-206ENST00000428313 PPP1R10Q96QC0 940 aaKnown RBP16.84■□□□□ 0.29
C9orf3-206ENST00000428313 SF3B1O75533 1304 aaKnown RBP eCLIP16.83■□□□□ 0.286e-6■■■■■ 105.7
C9orf3-206ENST00000428313 MYO3BQ8WXR4 1341 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 FAM170AA1A519 330 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 ARHGAP42A6NI28 874 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 ATP2A1O14983 1001 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 CLIC2O15247 247 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 CYP26A1O43174 497 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 MARCH6O60337 910 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 PDGFRBP09619 1106 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 FAM58BPP0C7Q3 252 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 ATF3P18847 181 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 AOC1P19801 751 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 TMED10P49755 219 aaKnown RBP16.83■□□□□ 0.28
C9orf3-206ENST00000428313 BCAP31P51572 246 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 MYL7Q01449 175 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 CBWD6Q4V339 395 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 CBWD3Q5JTY5 395 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 CBWD5Q5RIA9 395 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 RWDD4Q6NW29 188 aaKnown RBP16.83■□□□□ 0.28
C9orf3-206ENST00000428313 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 LZTR1Q8N653 840 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 HERPUD2Q9BSE4 406 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 NACA2Q9H009 215 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 KLC2Q9H0B6 622 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 SELENONQ9NZV5 590 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 CNTN3Q9P232 1028 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 SCN7AQ01118 1682 aa16.83■□□□□ 0.28
C9orf3-206ENST00000428313 CAPN8A6NHC0 703 aa16.82■□□□□ 0.28
C9orf3-206ENST00000428313 RSPH10B2B2RC85 870 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms