RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 NUDT7P0C024 238 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 CSH1P0DML2 217 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 CSH2P0DML3 217 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 HAPLN1P10915 354 aaPredicted RBP9.79□□□□□ -0.84
SMC1A-203ENST00000428014 GLULP15104 373 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 TRIM21P19474 475 aaKnown RBP9.79□□□□□ -0.84
SMC1A-203ENST00000428014 CDC25CP30307 473 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 CYP2J2P51589 502 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 CLCN5P51795 746 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 GUCY2FP51841 1108 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 MARSP56192 900 aaKnown RBP9.79□□□□□ -0.84
SMC1A-203ENST00000428014 BFSP1Q12934 665 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 ADAM9Q13443 819 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 TRPC3Q13507 836 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 PHLDB3Q6NSJ2 640 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 GRASPQ7Z6J2 395 aaPredicted RBP9.79□□□□□ -0.84
SMC1A-203ENST00000428014 NPAS3Q8IXF0 933 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 ADGRF2Q8IZF7 708 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 OR10T2Q8NGX3 314 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 DEPDC1BQ8WUY9 529 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 DNASE1L2Q92874 299 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 ELSPBP1Q96BH3 223 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 SPATA17Q96L03 361 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 TSG101Q99816 390 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 DUSP9Q99956 384 aaKnown RBP9.79□□□□□ -0.84
SMC1A-203ENST00000428014 CYP3A43Q9HB55 503 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 GDPD2Q9HCC8 539 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 COMMD8Q9NX08 183 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 COQ4Q9Y3A0 265 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 MRPS23Q9Y3D9 190 aaKnown RBP9.79□□□□□ -0.84
SMC1A-203ENST00000428014 SNX9Q9Y5X1 595 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 MUC6Q6W4X9 2439 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 NCANO14594 1321 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 PTPRJQ12913 1337 aa9.79□□□□□ -0.84
SMC1A-203ENST00000428014 F5P12259 2224 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 LRRIQ3A6PVS8 624 aaPredicted RBP9.78□□□□□ -0.84
SMC1A-203ENST00000428014 CLIC2O15247 247 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 AKAP3O75969 853 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 GNA14O95837 355 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 SPATA31D3P0C874 917 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 DLATP10515 647 aaKnown RBP9.78□□□□□ -0.84
SMC1A-203ENST00000428014 KRT13P13646 458 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 TCF3P15923 654 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 CCNE1P24864 410 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
SMC1A-203ENST00000428014 MAGEA9P43362 315 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 PDE6CP51160 858 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 VAMP7P51809 220 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 TNNC1P63316 161 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 INCA1Q0VD86 236 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 DUSP4Q13115 394 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 NCOA4Q13772 614 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 KRT39Q6A163 491 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 SPATA31D4Q6ZUB0 917 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 PDZD4Q76G19 769 aaPredicted RBP9.78□□□□□ -0.84
SMC1A-203ENST00000428014 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 FRMD5Q7Z6J6 570 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 TMC8Q8IU68 726 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 CRYBG2Q8N1P7 616 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 SLC44A3Q8N4M1 653 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 FBXL6Q8N531 539 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 KBTBD7Q8WVZ9 684 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 ZNF516Q92618 1163 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 TNIP3Q96KP6 325 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 MYADMQ96S97 322 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 IMPG2Q9BZV3 1241 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 DNAJC25Q9H1X3 360 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 TMEM8AQ9HCN3 771 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 DDX43Q9NXZ2 648 aaKnown RBP9.78□□□□□ -0.84
SMC1A-203ENST00000428014 CEP72Q9P209 647 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 LIMD1Q9UGP4 676 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 DOCK6Q96HP0 2047 aa9.78□□□□□ -0.84
SMC1A-203ENST00000428014 TMEM221A6NGB7 291 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 M0R296 226 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 TRIM66O15016 1216 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 CCL16O15467 120 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 NOL4O94818 638 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-203ENST00000428014 KRT19P08727 400 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 EPB41P11171 864 aaKnown RBP9.77□□□□□ -0.85
SMC1A-203ENST00000428014 PRCPP42785 496 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 NOP14P78316 857 aaKnown RBP9.77□□□□□ -0.85
SMC1A-203ENST00000428014 PRKCQQ04759 706 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 TWF1Q12792 350 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 PNOCQ13519 176 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 MORC3Q14149 939 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 ZNF268Q14587 947 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-203ENST00000428014 WDR72Q3MJ13 1102 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 SLC39A12Q504Y0 691 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 ZNF667Q5HYK9 610 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 TDRD10Q5VZ19 366 aaKnown RBP9.77□□□□□ -0.85
SMC1A-203ENST00000428014 DNAJB7Q7Z6W7 309 aaPredicted RBP9.77□□□□□ -0.85
SMC1A-203ENST00000428014 FILIP1Q7Z7B0 1213 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 LRRTM3Q86VH5 581 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 GLYCTKQ8IVS8 523 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 FAM186BQ8IYM0 893 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 MYCBPAPQ8TBZ2 947 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 OVCA2Q8WZ82 227 aa9.77□□□□□ -0.85
SMC1A-203ENST00000428014 SMARCD2Q92925 531 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms