RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 B3GALNT2Q8NCR0 500 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 BCL7CQ8WUZ0 217 aaPredicted RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 RFFLQ8WZ73 363 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ZNF592Q92610 1267 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 SECISBP2LQ93073 1101 aaKnown RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 WDR24Q96S15 920 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 RTP3Q9BQQ7 232 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 HTATIP2Q9BUP3 242 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ISCUQ9H1K1 167 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 RC3H2Q9HBD1 1191 aaKnown RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 DDX43Q9NXZ2 648 aaKnown RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 MYO1AQ9UBC5 1043 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 CHORDC1Q9UHD1 332 aaPredicted RBP12.81□□□□□ -0.36
RFC4-206ENST00000427785 TSPAN16Q9UKR8 245 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 INTUQ9ULD6 942 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 PCDHB8Q9UN66 801 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 CEP83Q9Y592 693 aa12.81□□□□□ -0.36
RFC4-206ENST00000427785 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 GREB1Q4ZG55 1949 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 ANKRD62A6NC57 917 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 GABRDO14764 452 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 CYP11A1P05108 521 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 GZMAP12544 262 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 DNTTIP2Q5QJE6 756 aaKnown RBP12.8□□□□□ -0.36
RFC4-206ENST00000427785 LLGL2Q6P1M3 1020 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 PSRC1Q6PGN9 363 aaPredicted RBP12.8□□□□□ -0.36
RFC4-206ENST00000427785 PHLDB2Q86SQ0 1253 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 TTC30AQ86WT1 665 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 TMEM35BQ8NCS4 154 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 UBA3Q8TBC4 463 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 TOP1MTQ969P6 601 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 B3GALT6Q96L58 329 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■□□□□ 8.5
RFC4-206ENST00000427785 TMEM175Q9BSA9 504 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 CWH43Q9H720 699 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 CRTAC1Q9NQ79 661 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 TJP2Q9UDY2 1190 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 DNAI1Q9UI46 699 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 CYTH4Q9UIA0 394 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 ADAM28Q9UKQ2 775 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 FAN1Q9Y2M0 1017 aa12.8□□□□□ -0.36
RFC4-206ENST00000427785 CCDC85CA6NKD9 419 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 TADA2AO75478 443 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 FGBP02675 491 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 GALTP07902 379 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 TYMPP19971 482 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 CDH5P33151 784 aaPredicted RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 LHX1P48742 406 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 NAP1L1P55209 391 aaKnown RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 ETF1P62495 437 aaKnown RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 PTPN20Q4JDL3 420 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 TMEM240Q5SV17 173 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 ARHGAP17Q68EM7 881 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 FUT10Q6P4F1 479 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 LCLAT1Q6UWP7 414 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 PHF13Q86YI8 300 aaPredicted RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 MCOLN2Q8IZK6 566 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 CRYBG2Q8N1P7 616 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 SLC2A14Q8TDB8 520 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 ZNF689Q96CS4 500 aaPredicted RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 TMEM209Q96SK2 561 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 YME1L1Q96TA2 773 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 OSGEPQ9NPF4 335 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 CXXC1Q9P0U4 656 aaPredicted RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 CNOT8Q9UFF9 292 aaKnown RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 GTF3C4Q9UKN8 822 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 DSEQ9UL01 958 aa12.79□□□□□ -0.36
RFC4-206ENST00000427785 MRPL42Q9Y6G3 142 aaKnown RBP12.79□□□□□ -0.36
RFC4-206ENST00000427785 SF3B1O75533 1304 aaKnown RBP eCLIP12.79□□□□□ -0.36
RFC4-206ENST00000427785 PLXNA3P51805 1871 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 A0A0A6YYK5 440 aaPredicted RBP12.78□□□□□ -0.36
RFC4-206ENST00000427785 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 GRID2IPA4D2P6 1211 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 BTNL10A8MVZ5 291 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 KIF2AO00139 706 aaPredicted RBP12.78□□□□□ -0.36
RFC4-206ENST00000427785 TULP2O00295 520 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 CLDN5O00501 218 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 CYP1A2P05177 515 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 PTPN1P18031 435 aaKnown RBP12.78□□□□□ -0.36
RFC4-206ENST00000427785 PAX3P23760 479 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 RRM1P23921 792 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 PCSK1P29120 753 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 NOP2P46087 812 aaKnown RBP12.78□□□□□ -0.36
RFC4-206ENST00000427785 RGS7P49802 495 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 BCAT1P54687 386 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
RFC4-206ENST00000427785 PTP4A2Q12974 167 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 PDCLQ13371 301 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 BTG3Q14201 252 aaPredicted RBP12.78□□□□□ -0.36
RFC4-206ENST00000427785 STILQ15468 1287 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 CNGA2Q16280 664 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 PTPROQ16827 1216 aa12.78□□□□□ -0.36
RFC4-206ENST00000427785 INTS6LQ5JSJ4 861 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms