RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 TRPV4Q9HBA0 871 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 HEBP1Q9NRV9 189 aa19.76■□□□□ 0.75
GPC1-205ENST00000427506 HEPACAM2A8MVW5 462 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 DPYSL4O14531 572 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 GABRDO14764 452 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 CLSTN1O94985 981 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 KIF20AO95235 890 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 PRR29P0C7W0 189 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 CDC25CP30307 473 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 RPL10AP62906 217 aaKnown RBP19.75■□□□□ 0.75
GPC1-205ENST00000427506 ANGPT1Q15389 498 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 KRBA2Q6ZNG9 492 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 TPRG1Q6ZUI0 275 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 GPIHBP1Q8IV16 184 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 DNASE1L2Q92874 299 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 IRF7Q92985 503 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 GOLPH3LQ9H4A5 285 aa19.75■□□□□ 0.75
GPC1-205ENST00000427506 MAGED2Q9UNF1 606 aaPredicted RBP19.75■□□□□ 0.75
GPC1-205ENST00000427506 GOLGA6L4A6NEF3 574 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 PDXKO00764 312 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 ZNF263O14978 683 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 HCRTO43612 131 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 ZNF202O95125 648 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 CD72P21854 359 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 CYP2F1P24903 491 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 GPR15P49685 360 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 TNNC1P63316 161 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 NUCB2P80303 420 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 CYP4F8P98187 520 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 DDR2Q16832 855 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 ARID3BQ8IVW6 561 aaPredicted RBP19.74■□□□□ 0.75
GPC1-205ENST00000427506 MFSD6LQ8IWD5 586 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 ZNF516Q92618 1163 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 CCDC34Q96HJ3 373 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 SYT15Q9BQS2 421 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 SNX25Q9H3E2 840 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 ABCB6Q9NP58 842 aa19.74■□□□□ 0.75
GPC1-205ENST00000427506 MYBPHLA2RUH7 354 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 FAM170BA6NMN3 283 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 CALUO43852 315 aaPredicted RBP19.73■□□□□ 0.75
GPC1-205ENST00000427506 LRRN2O75325 713 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 PDGFRBP09619 1106 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 CSH1P0DML2 217 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 CSH2P0DML3 217 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 LMO2P25791 158 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 CASP4P49662 377 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 PSMC1P62191 440 aaKnown RBP19.73■□□□□ 0.75
GPC1-205ENST00000427506 DPYDQ12882 1025 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 BIRC3Q13489 604 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 WDR72Q3MJ13 1102 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 SDHAF4Q5VUM1 108 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 ZNF852Q6ZMS4 543 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 C4orf50Q6ZRC1 276 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 SCN4BQ8IWT1 228 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 KBTBD7Q8WVZ9 684 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 DDX23Q9BUQ8 820 aaKnown RBP19.73■□□□□ 0.75
GPC1-205ENST00000427506 KCTD10Q9H3F6 313 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 TASP1Q9H6P5 420 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 CDH9Q9ULB4 789 aa19.73■□□□□ 0.75
GPC1-205ENST00000427506 WDFY4Q6ZS81 3184 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 ATP2C2O75185 946 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 RHOBTB3O94955 611 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 NR3C1P04150 777 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 WARSP23381 471 aaKnown RBP19.72■□□□□ 0.75
GPC1-205ENST00000427506 AP3M2P53677 418 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 MYL6P60660 151 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 MAPRE1Q15691 268 aaKnown RBP19.72■□□□□ 0.75
GPC1-205ENST00000427506 CCDC142Q17RM4 750 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 CEP135Q66GS9 1140 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 LIMS2Q7Z4I7 341 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 SLC9A9Q8IVB4 645 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 STKLD1Q8NE28 680 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 OR6B3Q8NGW1 331 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 PARD3BQ8TEW8 1205 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 SYAP1Q96A49 352 aaPredicted RBP19.72■□□□□ 0.75
GPC1-205ENST00000427506 NELL2Q99435 816 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 PKMYT1Q99640 499 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 MKNK1Q9BUB5 465 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 BCO2Q9BYV7 579 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 IL21Q9HBE4 155 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 LTB4R2Q9NPC1 389 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 DMAC2Q9NW81 257 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 MAGEC2Q9UBF1 373 aaPredicted RBP19.72■□□□□ 0.75
GPC1-205ENST00000427506 NXF1Q9UBU9 619 aaKnown RBP19.72■□□□□ 0.75
GPC1-205ENST00000427506 FRMD4BQ9Y2L6 1034 aa19.72■□□□□ 0.75
GPC1-205ENST00000427506 MRPS17Q9Y2R5 130 aaKnown RBP19.72■□□□□ 0.75
GPC1-205ENST00000427506 MTF2Q9Y483 593 aaPredicted RBP19.72■□□□□ 0.75
GPC1-205ENST00000427506 LRRIQ3A6PVS8 624 aaPredicted RBP19.71■□□□□ 0.75
GPC1-205ENST00000427506 HMGA1P17096 107 aaKnown RBP19.71■□□□□ 0.75
GPC1-205ENST00000427506 ATICP31939 592 aa19.71■□□□□ 0.75
GPC1-205ENST00000427506 GNL1P36915 607 aaPredicted RBP19.71■□□□□ 0.75
GPC1-205ENST00000427506 CYP27A1Q02318 531 aa19.71■□□□□ 0.75
GPC1-205ENST00000427506 CFAP221Q4G0U5 840 aa19.71■□□□□ 0.75
GPC1-205ENST00000427506 FAM171BQ6P995 826 aa19.71■□□□□ 0.75
GPC1-205ENST00000427506 PLEKHO2Q8TD55 490 aa19.71■□□□□ 0.75
GPC1-205ENST00000427506 CSGALNACT1Q8TDX6 532 aa19.71■□□□□ 0.75
GPC1-205ENST00000427506 RSPRY1Q96DX4 576 aa19.71■□□□□ 0.75
GPC1-205ENST00000427506 FUBP3Q96I24 572 aaKnown RBP eCLIP19.71■□□□□ 0.75
GPC1-205ENST00000427506 MRPL45Q9BRJ2 306 aaKnown RBP19.71■□□□□ 0.75
GPC1-205ENST00000427506 OSBPL6Q9BZF3 934 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms