RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 DARS2Q6PI48 645 aaKnown RBP14.08□□□□□ -0.15
USP42-203ENST00000426246 MTDHQ86UE4 582 aaKnown RBP14.08□□□□□ -0.15
USP42-203ENST00000426246 FMNL3Q8IVF7 1028 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 NSUN6Q8TEA1 469 aaKnown RBP14.08□□□□□ -0.15
USP42-203ENST00000426246 PGM2Q96G03 612 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 MIS12Q9H081 205 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 SLC9A2Q9UBY0 812 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 DIS3Q9Y2L1 958 aaKnown RBP14.08□□□□□ -0.15
USP42-203ENST00000426246 MROH7Q68CQ1 1323 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 EME2A4GXA9 379 aaPredicted RBP14.08□□□□□ -0.16
USP42-203ENST00000426246 LYPLA2O95372 231 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 PSMC1P62191 440 aaKnown RBP14.08□□□□□ -0.16
USP42-203ENST00000426246 TMEM62Q0P6H9 643 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 ANKRD20A3Q5VUR7 823 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 NPNTQ6UXI9 565 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 RPAINQ86UA6 219 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 CHST13Q8NET6 341 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 ART4Q93070 314 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 GPRASP2Q96D09 838 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.16
USP42-203ENST00000426246 MYLK2Q9H1R3 596 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 CD48P09326 243 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 CCND2P30279 289 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 BMPR2Q13873 1038 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 EMC2Q15006 297 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 SLC39A4Q6P5W5 647 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 VSTM1Q6UX27 236 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
USP42-203ENST00000426246 NUDCD1Q96RS6 583 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 RPS6KC1Q96S38 1066 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 SENP7Q9BQF6 1050 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 ACSS2Q9NR19 701 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 AAASQ9NRG9 546 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 SEPT10Q9P0V9 454 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 POLIQ9UNA4 740 aa14.08□□□□□ -0.16
USP42-203ENST00000426246 IQCA1LA6NCM1 817 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 FAM47DPA6NHR8 397 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 PGK2P07205 417 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 ATXN3P54252 364 aaPredicted RBP14.07□□□□□ -0.16
USP42-203ENST00000426246 NCALDP61601 193 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 KDSRQ06136 332 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 ACTL9Q8TC94 416 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 ZNF606Q8WXB4 792 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 SPATC1LQ9H0A9 340 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 ZNFX1Q9P2E3 1918 aaKnown RBP14.07□□□□□ -0.16
USP42-203ENST00000426246 PSAPP07602 524 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 SP2Q02086 613 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 MMRN1Q13201 1228 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 OR6B2Q6IFH4 312 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 GADL1Q6ZQY3 521 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 LRRC6Q86X45 466 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP42-203ENST00000426246 STRA6Q9BX79 667 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 APOBEC3GQ9HC16 384 aaKnown RBP14.07□□□□□ -0.16
USP42-203ENST00000426246 MRPL47Q9HD33 250 aaKnown RBP14.07□□□□□ -0.16
USP42-203ENST00000426246 CYP26B1Q9NR63 512 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 KCND2Q9NZV8 630 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 PCYOX1Q9UHG3 505 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 CES2O00748 559 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 GRIN3BO60391 1043 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 FAM155BO75949 473 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 STBD1O95210 358 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 GZMAP12544 262 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 CUL2Q13617 745 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 MUM1Q2TAK8 710 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 GNPTABQ3T906 1256 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 GJC2Q5T442 439 aaPredicted RBP14.07□□□□□ -0.16
USP42-203ENST00000426246 ARMC9Q7Z3E5 817 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 FGD4Q96M96 766 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 FAM111AQ96PZ2 611 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 RBPJLQ9UBG7 517 aa14.07□□□□□ -0.16
USP42-203ENST00000426246 NUDT17P0C025 328 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 EDNRBP24530 442 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 PHKA2P46019 1235 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 KRT76Q01546 638 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 OTUD4Q01804 1114 aaKnown RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 SPARCL1Q14515 664 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 SLC1A5Q15758 541 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 TRMT10CQ7L0Y3 403 aaKnown RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 SLC25A41Q8N5S1 370 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 TTC8Q8TAM2 541 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 ASAP3Q8TDY4 903 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 CFAP57Q96MR6 1250 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 MAFGO15525 162 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 MT-ND3P03897 115 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 HIF1AQ16665 826 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 TAF1BQ53T94 588 aaPredicted RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 IL31Q6EBC2 164 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 HACE1Q8IYU2 909 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 CCDC124Q96CT7 223 aaKnown RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 FBXO6Q9NRD1 293 aaPredicted RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.06□□□□□ -0.16
USP42-203ENST00000426246 ZFP69BQ9UJL9 534 aa14.06□□□□□ -0.16
USP42-203ENST00000426246 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
USP42-203ENST00000426246 GTF2BQ00403 316 aa14.05□□□□□ -0.16
USP42-203ENST00000426246 MAMLD1Q13495 774 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms