RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 METTL23Q86XA0 190 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 TCEAL8Q8IYN2 117 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 GPD1LQ8N335 351 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 ZSWIM2Q8NEG5 633 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 LEO1Q8WVC0 666 aaPredicted RBP13.71□□□□□ -0.21
SGCE-203ENST00000425444 FAM3CQ92520 227 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 MCRS1Q96EZ8 462 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 PGLYRP2Q96PD5 576 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 ADAM33Q9BZ11 813 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 DSEQ9UL01 958 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 MRPS23Q9Y3D9 190 aaKnown RBP13.71□□□□□ -0.21
SGCE-203ENST00000425444 INSL5Q9Y5Q6 135 aa13.71□□□□□ -0.21
SGCE-203ENST00000425444 ANO9A1A5B4 782 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 CYB561D2O14569 222 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 KIAA0391O15091 583 aaKnown RBP13.7□□□□□ -0.22
SGCE-203ENST00000425444 OAZ2O95190 189 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 SEC24AO95486 1093 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 ITGB3P05106 788 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 RHOP08100 348 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 OR4Q2P0C623 313 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 TMEM191BP0C7N4 346 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 PFKFB1P16118 471 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 PTPN2P17706 415 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 NOVA1P51513 510 aaKnown RBP13.7□□□□□ -0.22
SGCE-203ENST00000425444 TWF1Q12792 350 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 CUL4BQ13620 913 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 GRM2Q14416 872 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 RNF19BQ6ZMZ0 732 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 GRAMD1CQ8IYS0 662 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 CACTINQ8WUQ7 758 aaKnown RBP13.7□□□□□ -0.22
SGCE-203ENST00000425444 ZCCHC14Q8WYQ9 949 aaKnown RBP13.7□□□□□ -0.22
SGCE-203ENST00000425444 CORO1BQ9BR76 489 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 GDE1Q9NZC3 331 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 HSPBP1Q9NZL4 362 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 DNMT3BQ9UBC3 853 aaKnown RBP13.7□□□□□ -0.22
SGCE-203ENST00000425444 ZDHHC9Q9Y397 364 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
SGCE-203ENST00000425444 KALRNO60229 2985 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 ANK1P16157 1881 aa13.7□□□□□ -0.22
SGCE-203ENST00000425444 A0A1B0GVL5 298 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 ZNF233A6NK53 670 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 GIPC1O14908 333 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 ZIC2O95409 532 aaPredicted RBP13.69□□□□□ -0.22
SGCE-203ENST00000425444 KRT19P08727 400 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 SLFN14P0C7P3 912 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 POLR2BP30876 1174 aaKnown RBP13.69□□□□□ -0.22
SGCE-203ENST00000425444 PNPLA4P41247 253 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 GAS6Q14393 721 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 PDZD4Q76G19 769 aaPredicted RBP13.69□□□□□ -0.22
SGCE-203ENST00000425444 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 THEM5Q8N1Q8 247 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 SPEM1Q8N4L4 309 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 ELSPBP1Q96BH3 223 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 TMEM121BQ9BXQ6 578 aaPredicted RBP13.69□□□□□ -0.22
SGCE-203ENST00000425444 PDE11AQ9HCR9 933 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 MAFFQ9ULX9 164 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 YIPF1Q9Y548 306 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 PIAS3Q9Y6X2 628 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 CACNA1EQ15878 2313 aa13.69□□□□□ -0.22
SGCE-203ENST00000425444 PVALEFA0A1B0GWK0 134 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 TAF4O00268 1085 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
SGCE-203ENST00000425444 CMA1P23946 247 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 SYKP43405 635 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 CYP2J2P51589 502 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 WNT7BP56706 349 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 ZNF252P-AS1Q0IIN9 211 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 BFSP1Q12934 665 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 GPR17Q13304 367 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 PLD1Q13393 1074 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 SURF1Q15526 300 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 CYP4A22Q5TCH4 519 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
SGCE-203ENST00000425444 RNF43Q68DV7 783 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 EPM2AIP1Q7L775 607 aaPredicted RBP13.68□□□□□ -0.22
SGCE-203ENST00000425444 CBWD2Q8IUF1 395 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 CSGALNACT2Q8N6G5 542 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 ZNF507Q8TCN5 953 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 GATA6Q92908 595 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 IRF7Q92985 503 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 ZNF512Q96ME7 567 aaPredicted RBP13.68□□□□□ -0.22
SGCE-203ENST00000425444 TRMT61BQ9BVS5 477 aaKnown RBP13.68□□□□□ -0.22
SGCE-203ENST00000425444 MTMR12Q9C0I1 747 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 SCAND2PQ9GZW5 306 aaPredicted RBP13.68□□□□□ -0.22
SGCE-203ENST00000425444 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 KIAA1586Q9HCI6 787 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 ASAH2Q9NR71 780 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 AGPAT3Q9NRZ7 376 aa13.68□□□□□ -0.22
SGCE-203ENST00000425444 USP25Q9UHP3 1055 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms