RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 LMO3Q8TAP4 145 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 GOLGA1Q92805 767 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 MRPL38Q96DV4 380 aaKnown RBP16.66■□□□□ 0.26
SHOX2-202ENST00000425436 RPGRIP1Q96KN7 1286 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
SHOX2-202ENST00000425436 ZBP1Q9H171 429 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 TRIM10Q9UDY6 481 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 SAR1BQ9Y6B6 198 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 MTCH2Q9Y6C9 303 aa16.66■□□□□ 0.26
SHOX2-202ENST00000425436 PRRC2BQ5JSZ5 2229 aaKnown RBP16.66■□□□□ 0.26
SHOX2-202ENST00000425436 HIDE1A8MVS5 230 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 KPNA7A9QM74 516 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 CLSTN1O94985 981 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 APBA1Q02410 837 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 NCOA4Q13772 614 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 PTPROQ16827 1216 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 PRSS55Q6UWB4 352 aaPredicted RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 LRRC52Q8N7C0 313 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 TAS1R2Q8TE23 839 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 RIN2Q8WYP3 895 aaPredicted RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 SUSD3Q96L08 255 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 SENP8Q96LD8 212 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 PI4K2AQ9BTU6 479 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 HERC2P3Q9BVR0 1158 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 LMAN2LQ9H0V9 348 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 CHST7Q9NS84 486 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 A0A087X0T9 212 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 MACROD2A1Z1Q3 448 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 CYB561D2O14569 222 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 FSCN2O14926 492 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 TUBBP07437 444 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 FAM228BP0C875 321 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 CTSAP10619 480 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 FGFR3P22607 806 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 PNPLA4P41247 253 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 GLUD2P49448 558 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 AARSP49588 968 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 MFAP3P55082 362 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 AMPD2Q01433 879 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 CKAP4Q07065 602 aaKnown RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 ELAVL2Q12926 359 aaKnown RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 SV2CQ496J9 727 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 KIAA0319Q5VV43 1072 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 SMYD5Q6GMV2 418 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 ENOSF1Q7L5Y1 443 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 ZNF571Q7Z3V5 609 aaPredicted RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 RBM23Q86U06 439 aaKnown RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 MICALL1Q8N3F8 863 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 GPR161Q8N6U8 529 aaKnown RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 SEMA4DQ92854 862 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 CALR3Q96L12 384 aaKnown RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 ZNF560Q96MR9 790 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 TTPALQ9BTX7 342 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
SHOX2-202ENST00000425436 SNX9Q9Y5X1 595 aa16.65■□□□□ 0.26
SHOX2-202ENST00000425436 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 M0QZQ0 153 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 PER2O15055 1255 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 URODP06132 367 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 RPL17P18621 184 aaKnown RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 PIK3CAP42336 1068 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 DSG1Q02413 1049 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 SMC1AQ14683 1233 aaKnown RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 SPOPLQ6IQ16 392 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 PHLDB3Q6NSJ2 640 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 ALKBH5Q6P6C2 394 aaKnown RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 ADGRD2Q7Z7M1 963 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 MRPL43Q8N983 215 aaKnown RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 FBXL13Q8NEE6 735 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 TSC1Q92574 1164 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 XYLT2Q9H1B5 865 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 UBE2TQ9NPD8 197 aaPredicted RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 ARGLU1Q9NWB6 273 aaPredicted RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 NXF1Q9UBU9 619 aaKnown RBP16.64■□□□□ 0.25
SHOX2-202ENST00000425436 NAGPAQ9UK23 515 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 PCDHB8Q9UN66 801 aa16.64■□□□□ 0.25
SHOX2-202ENST00000425436 CTAGE15A4D2H0 777 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 C2orf71A6NGG8 1288 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 LILRB3O75022 631 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 CTAGE8P0CG41 777 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 FOSL2P15408 326 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 TCP1P17987 556 aaKnown RBP16.63■□□□□ 0.25
SHOX2-202ENST00000425436 NAP1L1P55209 391 aaKnown RBP16.63■□□□□ 0.25
SHOX2-202ENST00000425436 CCDC85BQ15834 202 aaPredicted RBP16.63■□□□□ 0.25
SHOX2-202ENST00000425436 ERCC6LQ2NKX8 1250 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 VARS2Q5ST30 1063 aaKnown RBP16.63■□□□□ 0.25
SHOX2-202ENST00000425436 RSRC2Q7L4I2 434 aaKnown RBP16.63■□□□□ 0.25
SHOX2-202ENST00000425436 CTAGE6Q86UF2 777 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 GLYCTKQ8IVS8 523 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 CTAGE4Q8IX94 777 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 LNX1Q8TBB1 728 aaPredicted RBP16.63■□□□□ 0.25
SHOX2-202ENST00000425436 UBE2Q2Q8WVN8 375 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 MMS19Q96T76 1030 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 NGRNQ9NPE2 291 aaKnown RBP16.63■□□□□ 0.25
SHOX2-202ENST00000425436 STK39Q9UEW8 545 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 POLIQ9UNA4 740 aa16.63■□□□□ 0.25
SHOX2-202ENST00000425436 DUSP10Q9Y6W6 482 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms