RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 PHKA1P46020 1223 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 TOB1P50616 345 aaPredicted RBP6.22□□□□□ -1.41
LINC01040-201ENST00000425048 HOXA4Q00056 320 aaPredicted RBP6.22□□□□□ -1.41
LINC01040-201ENST00000425048 UAP1L1Q3KQV9 507 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 ICE2Q659A1 982 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 CATSPERGQ6ZRH7 1159 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 PPP1R32Q7Z5V6 425 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 RGMAQ96B86 450 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 TEKT5Q96M29 485 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 PUS7Q96PZ0 661 aaKnown RBP6.22□□□□□ -1.41
LINC01040-201ENST00000425048 TMEM79Q9BSE2 394 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 WACQ9BTA9 647 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 TINAGL1Q9GZM7 467 aaPredicted RBP6.22□□□□□ -1.41
LINC01040-201ENST00000425048 PRSS22Q9GZN4 317 aa6.22□□□□□ -1.41
LINC01040-201ENST00000425048 TUBA8Q9NY65 449 aaPredicted RBP6.22□□□□□ -1.41
LINC01040-201ENST00000425048 NTN1O95631 604 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 GNAI2P04899 355 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 PLCD1P51178 756 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 FOXG1P55316 489 aaPredicted RBP6.21□□□□□ -1.42
LINC01040-201ENST00000425048 KRT85P78386 507 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 LAMB3Q13751 1172 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 SYDE2Q5VT97 1194 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 AWAT2Q6E213 333 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 TMEM108Q6UXF1 575 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 ZNF517Q6ZMY9 492 aaPredicted RBP6.21□□□□□ -1.42
LINC01040-201ENST00000425048 FAM90A1Q86YD7 464 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 HMCESQ96FZ2 354 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 C1orf43Q9BWL3 253 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 SERPINB13Q9UIV8 391 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 ZDHHC8Q9ULC8 765 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 SH2B3Q9UQQ2 575 aa6.21□□□□□ -1.42
LINC01040-201ENST00000425048 CYP2D7A0A087X1C5 515 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 SMIM35A0A1B0GVV1 85 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 KCNU1A8MYU2 1149 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 SFPQP23246 707 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC01040-201ENST00000425048 NR4A2P43354 598 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 FXR1P51114 621 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC01040-201ENST00000425048 ADKP55263 362 aaKnown RBP6.2□□□□□ -1.42
LINC01040-201ENST00000425048 PCBP2Q15366 365 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC01040-201ENST00000425048 TREML2Q5T2D2 321 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 PXDC1Q5TGL8 231 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 EFCAB2Q5VUJ9 269 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 TECPR1Q7Z6L1 1165 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 GALNT16Q8N428 558 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 SPRTNQ9H040 489 aaPredicted RBP6.2□□□□□ -1.42
LINC01040-201ENST00000425048 VPS16Q9H269 839 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 DUSP22Q9NRW4 184 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 PCDHA3Q9Y5H8 950 aa6.2□□□□□ -1.42
LINC01040-201ENST00000425048 SHTN1A0MZ66 631 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 ADAMTS3O15072 1205 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 IL6RP08887 468 aaPredicted RBP6.19□□□□□ -1.42
LINC01040-201ENST00000425048 LIPAP38571 399 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 POLGP54098 1239 aaPredicted RBP6.19□□□□□ -1.42
LINC01040-201ENST00000425048 PDE1AP54750 535 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 TRIP6Q15654 476 aaKnown RBP6.19□□□□□ -1.42
LINC01040-201ENST00000425048 GPR162Q16538 588 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 THEMIS2Q5TEJ8 643 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 FAM160B1Q5W0V3 765 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 MAVSQ7Z434 540 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 CHSY1Q86X52 802 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC01040-201ENST00000425048 PNLDC1Q8NA58 520 aaKnown RBP6.19□□□□□ -1.42
LINC01040-201ENST00000425048 TNPO1Q92973 898 aaKnown RBP6.19□□□□□ -1.42
LINC01040-201ENST00000425048 ASB2Q96Q27 587 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 WDCPQ9H6R7 721 aa6.19□□□□□ -1.42
LINC01040-201ENST00000425048 FNDC1Q4ZHG4 1894 aaPredicted RBP6.19□□□□□ -1.42
LINC01040-201ENST00000425048 LRRC14BA6NHZ5 514 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 ENGP17813 658 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 DAZAP2Q15038 168 aaPredicted RBP6.18□□□□□ -1.42
LINC01040-201ENST00000425048 ABCB5Q2M3G0 1257 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 NAPRTQ6XQN6 538 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 PARS2Q7L3T8 475 aaKnown RBP6.18□□□□□ -1.42
LINC01040-201ENST00000425048 PNMA8AQ86V59 439 aaPredicted RBP6.18□□□□□ -1.42
LINC01040-201ENST00000425048 KRT73Q86Y46 540 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 WASF1Q92558 559 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 C5orf34Q96MH7 638 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 TRHDEQ9UKU6 1024 aa6.18□□□□□ -1.42
LINC01040-201ENST00000425048 M0QYG6 137 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 SLC16A6O15403 523 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 CYP4F2P78329 520 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 GTF2H3Q13889 308 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 BOP1Q14137 746 aaKnown RBP6.17□□□□□ -1.42
LINC01040-201ENST00000425048 RABEP1Q15276 862 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 TBC1D25Q3MII6 688 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 MIS18BP1Q6P0N0 1132 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 LAYNQ6UX15 382 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 LRRC71Q8N4P6 559 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 CPA6Q8N4T0 437 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 C8orf58Q8NAV2 365 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 FAM46DQ8NEK8 389 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 MRPL46Q9H2W6 279 aaKnown RBP6.17□□□□□ -1.42
LINC01040-201ENST00000425048 ADAMTS5Q9UNA0 930 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 ATP8A1Q9Y2Q0 1164 aa6.17□□□□□ -1.42
LINC01040-201ENST00000425048 INSIG1O15503 277 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 NPSP0C0P6 89 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 CBSLP0DN79 551 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 SNHG28P0DPA3 235 aa6.16□□□□□ -1.42
LINC01040-201ENST00000425048 TKTP29401 623 aaKnown RBP6.16□□□□□ -1.42
LINC01040-201ENST00000425048 CBSP35520 551 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms