RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SRP68Q9UHB9 627 aaKnown RBP4.09□□□□□ -1.75
SF3B1-205ENST00000424674 ITGB1BP2Q9UKP3 347 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 FAM184BQ9ULE4 1060 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 DUSP12Q9UNI6 340 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 TSC22D4Q9Y3Q8 395 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SPO11Q9Y5K1 396 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 SNX8Q9Y5X2 465 aa4.09□□□□□ -1.75
SF3B1-205ENST00000424674 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 LGALS16A8MUM7 142 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 FAM25EA8MYX2 175 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 ACOT7O00154 380 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 HNRNPDLO14979 420 aaKnown RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 NPC1O15118 1278 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 KIF5CO60282 957 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 TSPAN9O75954 239 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 GOSR1O95249 250 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 AMY2AP04746 511 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 ALDH2P05091 517 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 MTHFD2P13995 350 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 HNRNPLP14866 589 aaKnown RBP eCLIP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 AMY2BP19961 511 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 EEF1GP26641 437 aaKnown RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 CSF2RBP32927 897 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 PRPHP41219 470 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 SELENOPP49908 381 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 FXR1P51114 621 aaKnown RBP eCLIP4.08□□□□□ -1.762e-6■■■□□ 15.6
SF3B1-205ENST00000424674 LIMK1P53667 647 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 CASP6P55212 293 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 SRSF2Q01130 221 aaKnown RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 COX10Q12887 443 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 BFSP1Q12934 665 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 CDSNQ15517 529 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 TANGO2Q6ICL3 276 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 GALNT17Q6IS24 598 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 FSTL4Q6MZW2 842 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 NAA16Q6N069 864 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 C16orf87Q6PH81 154 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 OTOP1Q7RTM1 612 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 OVCH1Q7RTY7 1134 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 GALNT7Q86SF2 657 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 SLC9B2Q86UD5 537 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 CPOQ8IVL8 374 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 RNF168Q8IYW5 571 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 OR8H3Q8N146 312 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF619Q8N2I2 560 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 NAT8LQ8N9F0 302 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 LILRB1Q8NHL6 650 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 FBXW5Q969U6 566 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 MUL1Q969V5 352 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 AJUBAQ96IF1 538 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 FEM1CQ96JP0 617 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 PTPN18Q99952 460 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 PDCD2LQ9BRP1 358 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 DESI2Q9BSY9 194 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 FSD1Q9BTV5 496 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 BOCQ9BWV1 1114 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 EIF2AQ9BY44 585 aaKnown RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 KLC2Q9H0B6 622 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 OR10A4Q9H209 315 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 SYNCQ9H7C4 482 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 ZNF287Q9HBT7 754 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 OBP2BQ9NPH6 170 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 CCDC177Q9NQR7 707 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 TRMT1Q9NXH9 659 aaKnown RBP4.08□□□□□ -1.76
SF3B1-205ENST00000424674 TMOD4Q9NZQ9 345 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 OGDHLQ9ULD0 1010 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 ARHGAP26Q9UNA1 814 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 SRPK3Q9UPE1 567 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 TMEM5Q9Y2B1 443 aa4.08□□□□□ -1.76
SF3B1-205ENST00000424674 RSF1Q96T23 1441 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 FLT1P17948 1338 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 A0A1W2PPC4 97 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 LRRC14BA6NHZ5 514 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 FAM90A27PA6NNH2 459 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ISM1B1AKI9 464 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 PATE3B3GLJ2 98 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 H0Y858 1186 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 GTPBP1O00178 669 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TRIM38O00635 465 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 PSMA7O14818 248 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 PHGDHO43175 533 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 AKR1B10O60218 316 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TPPPO94811 219 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ADRB2P07550 413 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 CLTBP09497 229 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 CCDC175P0C221 793 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ACADMP11310 421 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 PORP16435 677 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 HDCP19113 662 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ENPP1P22413 925 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 HSPA4P34932 840 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ALDH3A2P51648 485 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 ST5P78524 1137 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 RBP5P82980 135 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 SMAD3P84022 425 aaKnown RBP4.07□□□□□ -1.76
SF3B1-205ENST00000424674 CREMQ03060 361 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 UBE3AQ05086 875 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 AP1B1Q10567 949 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 TFCP2Q12800 502 aa4.07□□□□□ -1.76
SF3B1-205ENST00000424674 MRPL28Q13084 256 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms