RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 IRF2BP1Q8IU81 584 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 EFCAB13Q8IY85 973 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 COLGALT2Q8IYK4 626 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 TTC39CQ8N584 583 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 FBXL13Q8NEE6 735 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 IQCDQ96DY2 449 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 EEF2KMTQ96G04 330 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 ZMAT2Q96NC0 199 aaKnown RBP7.55□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF558Q96NG5 402 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 C11orf84Q9BUA3 381 aaPredicted RBP7.55□□□□□ -1.2
EPHA4-206ENST00000424339 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 DNAI2Q9GZS0 605 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 NDST4Q9H3R1 872 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 VRTNQ9H8Y1 702 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 SAMSN1Q9NSI8 373 aaKnown RBP7.55□□□□□ -1.2
EPHA4-206ENST00000424339 MARK1Q9P0L2 795 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 LIMA1Q9UHB6 759 aaKnown RBP7.55□□□□□ -1.2
EPHA4-206ENST00000424339 FAN1Q9Y2M0 1017 aa7.55□□□□□ -1.2
EPHA4-206ENST00000424339 SF3B1O75533 1304 aaKnown RBP eCLIP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 LGALS16A8MUM7 142 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 C9orf172C9J069 976 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 M0R082 166 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PODXLO00592 558 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PIRO00625 290 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 MEFVO15553 781 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 CBFA2T2O43439 604 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 B3GAT3O94766 335 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 C4BPAP04003 597 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 GALTP07902 379 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 IBSPP21815 317 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PIK3CAP42336 1068 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 TAF6P49848 677 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 BCAR1P56945 870 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 MYL7Q01449 175 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 KRT17Q04695 432 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 NCOA4Q13772 614 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 KRT31Q15323 416 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 VWA3BQ502W6 1294 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PAN2Q504Q3 1202 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 GLRA4Q5JXX5 417 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 SPOUT1Q5T280 376 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 TMCO4Q5TGY1 634 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 C9orf57Q5W0N0 161 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PDE12Q6L8Q7 609 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 FAM117BQ6P1L5 589 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 KCNT2Q6UVM3 1135 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 GBP6Q6ZN66 633 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 DPH6Q7L8W6 267 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 LUZP1Q86V48 1076 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 CREBRFQ8IUR6 639 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 FMNL3Q8IVF7 1028 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 C1orf127Q8N9H9 656 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 ZSWIM2Q8NEG5 633 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF417Q8TAU3 575 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 JAKMIP2Q96AA8 810 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 TMEM169Q96HH4 297 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 TGS1Q96RS0 853 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 ZNF587Q96SQ5 575 aaPredicted RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 NRDE2Q9H7Z3 1164 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 SLC28A3Q9HAS3 691 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 ETNK1Q9HBU6 452 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 SPG21Q9NZD8 308 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PUF60Q9UHX1 559 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 ADAM28Q9UKQ2 775 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 DSEQ9UL01 958 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 HCN2Q9UL51 889 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 LZTS1Q9Y250 596 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 SSX2IPQ9Y2D8 614 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 NUB1Q9Y5A7 615 aa7.54□□□□□ -1.2
EPHA4-206ENST00000424339 MRPL42Q9Y6G3 142 aaKnown RBP7.54□□□□□ -1.2
EPHA4-206ENST00000424339 NLRC5Q86WI3 1866 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 LINC01553A4QN01 128 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 NRP1O14786 923 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 SYN3O14994 580 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 DDHD2O94830 711 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 ASS1P00966 412 aaKnown RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 SERPINC1P01008 464 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 ITGB3P05106 788 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 KRT19P08727 400 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 TRIM49P0CI25 452 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 TRIM49CP0CI26 452 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 ODC1P11926 461 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 TBXAS1P24557 533 aaPredicted RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 MSNP26038 577 aaKnown RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 BMPR1AP36894 532 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 OR1G1P47890 313 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 GCLMP48507 274 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 AARSP49588 968 aaKnown RBP eCLIP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 CLCNKBP51801 687 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 COPB1P53618 953 aaKnown RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 ERVK-21P61565 698 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 YWHAEP62258 255 aaKnown RBP7.53□□□□□ -1.2
EPHA4-206ENST00000424339 DLG4P78352 724 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 PLCB3Q01970 1234 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 CREMQ03060 361 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 PPP3CAQ08209 521 aa7.53□□□□□ -1.2
EPHA4-206ENST00000424339 EXOC3L4Q17RC7 722 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms